Factsheet for Zm00001d002087_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d016570_P001
Zm00001d017390_P001
Zm00001d025939_P003
Zm00001d036342_P001
Zm00001d049553_P001
Zm00001d050563_P001
Zm00001d051288_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32140.1	Zm00001d016570_P001	AT1G27300.1	21798944
AT4G32140.1	Zm00001d050563_P001	AT1G27300.1	21798944
AT4G32140.1	Zm00001d017390_P001	AT3G60600.1	21798944
AT4G32140.1	Zm00001d025939_P003	AT3G60600.1	21798944
AT4G32140.1	Zm00001d036342_P001	AT3G60600.1	21798944
AT4G32140.1	Zm00001d049553_P001	AT3G60600.1	21798944
AT4G32140.1	Zm00001d051288_P001	AT3G60600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12961	Sorghum	plasma membrane	94.72	94.72
Zm00001d026442_P001	Maize	plasma membrane	68.84	92.26
Os04t0645600-01	Rice	plasma membrane	83.92	84.34
TraesCS2A01G516300.1	Wheat	plasma membrane	82.91	83.12
TraesCS2D01G518100.1	Wheat	plasma membrane	82.41	82.41
TraesCS2B01G545100.1	Wheat	plasma membrane	82.41	82.41
HORVU2Hr1G114380.1	Barley	plasma membrane	82.41	82.0
VIT_04s0008g06500.t01	Wine grape	plasma membrane	66.83	67.17
AT4G32140.1	Thale cress	plasma membrane	66.33	67.01
Solyc08g021960.2.1	Tomato	plasma membrane	65.08	65.9
KRH52408	Soybean	plasma membrane	64.82	65.48
KRH61738	Soybean	plasma membrane	63.82	64.63
KRH15833	Soybean	plasma membrane	62.56	63.36
KRH05190	Soybean	plasma membrane	62.31	63.1
GSMUA_Achr3P19860_001	Banana	plasma membrane	62.81	62.66
GSMUA_Achr6P02900_001	Banana	plasma membrane	64.57	58.41
VIT_11s0118g00270.t01	Wine grape	extracellular	10.3	57.75
CDY23320	Canola	plasma membrane	64.07	57.69
Bra040066.1-P	Field mustard	plasma membrane	63.82	57.6
PGSC0003DMT400062155	Potato	plasma membrane	50.25	51.15
Zm00001d014470_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	18.09	26.97
Zm00001d036564_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	24.87	21.95
Zm00001d014468_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	25.13	21.74
Zm00001d014469_P001	Maize	extracellular	7.79	20.39

Protein Annotations

EMBL:BT042148	EnsemblPlants:Zm00001d002087_P001	EnsemblPlants:Zm00001d002087_T001	EnsemblPlantsGene:Zm00001d002087	EntrezGene:100273983	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:EamA_dom	PANTHER:PTHR23051	PANTHER:PTHR23051:SF7	PFAM:PF00892
ProteinID:ONM12978.1	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI00017B7C1B	UniProt:B4FYG0
MapMan:24.2.1.7	:	:	:	:	:

Description

EamA-like transporter family

Coordinates

chr2:+:5777235..5781446

Molecular Weight (calculated)

43294.2 Da

IEP (calculated)

7.871

GRAVY (calculated)

0.527

Length

398 amino acids

Sequence
(BLAST)

001: MGSSLKYRSG LCLIVAVVLI WVISAEVTQG IFTKYRHPFA VTYLGASLMV IYLPLSFLKD FIYNSLRRHS RNTSASKIAS KSSFGGSAPL KNGEFQKMLE
101: MESQKTIVVN CPDVSIPVVE ETKPLICGIT EMDDGLFKDK QLSTKEIATY GLYLCPLWFV TEYLSNAALA RTSVASTTVL SSTSGLFTLF IGVLLGQDSI
201: NAAKIIAVFI SMAGVVMTTV GQTWASDESE AGKSGFTQRT LLGDMFGLMS AIAYGLFTVL LKKFCGEEGE KVDVQKLFGY LGLFTLVALW WIVWPLTALG
301: VEPKFSMPHS AKVDEVVVAN SLIGSVLSDY FWALSVVWTT PLVATLGMSL TIPIAMVADM IIHGRHYSAV YILGSVQVFS GFVIANLADR FSRSLGLS

Best Arabidopsis Sequence Match ( AT4G32140.1 )
(BLAST)

001: MGWRYKAGLF LIGTVVIIWV TSAEVTQDIF TAYKQPFAVT YLGASLMIVY LPVAFLKDWL CRYLDRRSSK SNKIPALTDD SSVELGSPLR HKIIEMGLQG
101: TITKKDSEEH LSSHEEEDER PLIGKVREEV QTLKQRKEIT TKQIAMYGLY LAPIWFVTEY LSNAALARTS VASTTVLSST SGLFTLFIGV FLGQDTLNLS
201: KVVAVFVSMA GVVMTTLGKT WASDESQLNS SLNGERSLMG DLFGLLSAVS YGLFTVLLKK FAGEEGEGVD VQKLFGYIGL FTLVALWWLV WPLTALGIEP
301: KFTIPHSVKV DEVVLANGFI GSVLSDYFWA LSVVWTTPLV ATLGMSLTIP LAMVADMMIH GRHYSAIYIL GSTQVFAGFV IANISDLFSK KLGL

Arabidopsis Description

AT4g32140/F10N7_50 [Source:UniProtKB/TrEMBL;Acc:O49378]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.