Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66751 | Canola | plasma membrane | 62.53 | 71.58 |
| CDY34916 | Canola | plasma membrane | 55.17 | 70.8 |
| Zm00001d014470_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 43.45 | 70.79 |
| Bra040359.1-P | Field mustard | plasma membrane | 47.82 | 70.03 |
| Bra001234.1-P | Field mustard | plasma membrane | 65.75 | 66.82 |
| CDY05314 | Canola | plasma membrane | 61.84 | 66.58 |
| CDX82733 | Canola | plasma membrane | 32.87 | 66.51 |
| CDY08016 | Canola | plasma membrane | 65.06 | 66.43 |
| CDX74064 | Canola | plasma membrane | 65.29 | 66.36 |
| PGSC0003DMT400045503 | Potato | plasma membrane | 64.14 | 66.11 |
| AT3G07080.1 | Thale cress | plasma membrane | 65.98 | 65.53 |
| Bra029620.1-P | Field mustard | cytosol, golgi, plastid | 23.45 | 65.38 |
| Solyc09g061320.2.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane | 64.37 | 64.22 |
| CDY65595 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 17.24 | 63.03 |
| KRH46755 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 63.45 | 63.01 |
| GSMUA_Achr1P26240_001 | Banana | plasma membrane | 60.46 | 62.62 |
| GSMUA_Achr11P... | Banana | plasma membrane | 60.23 | 60.37 |
| Os06t0681700-01 | Rice | plasma membrane | 62.07 | 60.0 |
| Zm00001d036564_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 60.92 | 58.76 |
| Zm00001d014468_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 61.84 | 58.48 |
| KXG20650 | Sorghum | plasma membrane | 61.15 | 58.21 |
| TraesCS7A01G452600.1 | Wheat | plasma membrane | 60.69 | 58.15 |
| TraesCS7D01G441800.2 | Wheat | plasma membrane | 60.46 | 57.93 |
| TraesCS7B01G352500.1 | Wheat | plasma membrane | 60.23 | 57.71 |
| CDY24649 | Canola | cytosol | 14.25 | 52.99 |
| Zm00001d014469_P001 | Maize | extracellular | 17.93 | 51.32 |
| HORVU7Hr1G102150.1 | Barley | cytosol, nucleus | 60.0 | 40.85 |
| VIT_04s0008g06500.t01 | Wine grape | plasma membrane | 22.76 | 25.0 |
| VIT_04s0008g06890.t01 | Wine grape | plasma membrane | 21.84 | 23.99 |
| VIT_11s0118g00270.t01 | Wine grape | extracellular | 3.91 | 23.94 |
Protein Annotations
| EntrezGene:100258568 | wikigene:100258568 | MapMan:24.2.1.7 | ProteinID:CCB60283 | ProteinID:CCB60283.1 | UniProt:F6I017 |
| EMBL:FN596502 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EntrezGene:LOC100258568 | wikigene:LOC100258568 |
| PFAM:PF06027 | PANTHER:PTHR23051 | PANTHER:PTHR23051:SF1 | InterPro:SLC35_F1/F2/F6 | SUPFAM:SSF103481 | TMHMM:TMhelix |
| UniParc:UPI00015CBD91 | ArrayExpress:VIT_07s0005g06440 | EnsemblPlantsGene:VIT_07s0005g06440 | EnsemblPlants:VIT_07s0005g06440.t01 | unigene:Vvi.13825 | RefSeq:XP_002267492 |
| RefSeq:XP_002267492.1 | RefSeq:XP_010652507.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7:-:11589634..11593624
Molecular Weight (calculated)
47391.7 Da
IEP (calculated)
4.581
GRAVY (calculated)
0.491
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTEVWRWVL GLIYIVAVAS IWIAASYVVQ SVVDAGVSPF LITYICNSLF VIYIPLVEIG RYLEDSYGSL CFWRSKKDIG LQEIGDSEQV VLLGESNLGA
101: RVGGSKQPVI LEQGEISQHR IGIVSELDLK VERFEAASLD QAIVRKDGDE QLDSKGRWTR TRVAKASLLV CPFWFLAQLT FNLSLEYTTV TSNTILSSAS
201: SLFTFLVALV FLGEKFTWVK LISVLLCMGG TIIVSLGDSE TGLSAIATNP LLGDIFALVS AALYAVYITL IRKNIPDDDG KSGQVSMAQF LGFLGLFNLL
301: IFLPVALILN FTKLEPFYTL TWKQLGLIVG KGLLDNVLSD YLWAKAILLT STTVATAGLT IQVPLAAVVD SLTGNAPNFM DYIGAAAVMA GFAGINIPID
401: DFCRSKEAGI ELEKENISST DQDHTLSIHK DTAIS
101: RVGGSKQPVI LEQGEISQHR IGIVSELDLK VERFEAASLD QAIVRKDGDE QLDSKGRWTR TRVAKASLLV CPFWFLAQLT FNLSLEYTTV TSNTILSSAS
201: SLFTFLVALV FLGEKFTWVK LISVLLCMGG TIIVSLGDSE TGLSAIATNP LLGDIFALVS AALYAVYITL IRKNIPDDDG KSGQVSMAQF LGFLGLFNLL
301: IFLPVALILN FTKLEPFYTL TWKQLGLIVG KGLLDNVLSD YLWAKAILLT STTVATAGLT IQVPLAAVVD SLTGNAPNFM DYIGAAAVMA GFAGINIPID
401: DFCRSKEAGI ELEKENISST DQDHTLSIHK DTAIS
001: MSTKLWRWVL GLIYLFAVAT IWIAASFVVQ SVVEAGVSPF LITFICNSLF VVYLPLFEIG RYLEDAYGSL LFWRSKRSHL MELVESEKAV LLGKDVSGVK
101: SDATESSGLV VREQEISEGG NGIESGLENI ELEIDASVNV SDGASGVSNK GLDEKGRWTR MRVAKVSLVI CPFWFLAQLT FNVSLKYTTV TSNTILSSAS
201: SLFTFLVSLI FLGEKFTWLK LFSVLLCMSG TIIVSMGDSE SKSNAVAKNP LLGDILSLVS AALYAVYITL IRKKLPDDDE RNGRVSMAQF LGFLGLFNFF
301: IFLPPALILN FTKRERFNAL TLKQFGLVVG KGLLDNVLSD YLWAKAVLLT TTTVATAGLT IQVPLAAIVD SLSGNKPSFT DYIGAAAVMV GFAGINIPSE
401: MFCKSKETAI ELEPGTSFTD PPPIVPDSIR VDSSLTVV
101: SDATESSGLV VREQEISEGG NGIESGLENI ELEIDASVNV SDGASGVSNK GLDEKGRWTR MRVAKVSLVI CPFWFLAQLT FNVSLKYTTV TSNTILSSAS
201: SLFTFLVSLI FLGEKFTWLK LFSVLLCMSG TIIVSMGDSE SKSNAVAKNP LLGDILSLVS AALYAVYITL IRKKLPDDDE RNGRVSMAQF LGFLGLFNFF
301: IFLPPALILN FTKRERFNAL TLKQFGLVVG KGLLDNVLSD YLWAKAVLLT TTTVATAGLT IQVPLAAIVD SLSGNKPSFT DYIGAAAVMV GFAGINIPSE
401: MFCKSKETAI ELEPGTSFTD PPPIVPDSIR VDSSLTVV
Arabidopsis Description
At3g07080 [Source:UniProtKB/TrEMBL;Acc:Q9SFT8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.