Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G352500.1 | Wheat | plasma membrane | 98.68 | 98.68 |
| TraesCS7A01G452600.1 | Wheat | plasma membrane | 98.46 | 98.46 |
| Zm00001d014470_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 49.78 | 84.64 |
| Os06t0681700-01 | Rice | plasma membrane | 77.31 | 78.0 |
| KXG20650 | Sorghum | plasma membrane | 75.11 | 74.62 |
| Zm00001d036564_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 73.35 | 73.84 |
| Zm00001d014468_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 74.01 | 73.04 |
| HORVU7Hr1G102150.1 | Barley | cytosol, nucleus | 92.07 | 65.41 |
| CDY66751 | Canola | plasma membrane | 52.86 | 63.16 |
| CDY34916 | Canola | plasma membrane | 46.48 | 62.24 |
| GSMUA_Achr11P... | Banana | plasma membrane | 59.47 | 62.21 |
| GSMUA_Achr1P26240_001 | Banana | plasma membrane | 57.27 | 61.9 |
| CDX82733 | Canola | plasma membrane | 29.07 | 61.4 |
| VIT_07s0005g06440.t01 | Wine grape | plasma membrane | 57.93 | 60.46 |
| Bra040359.1-P | Field mustard | plasma membrane | 39.21 | 59.93 |
| Bra029620.1-P | Field mustard | cytosol, golgi, plastid | 20.48 | 59.62 |
| CDY05314 | Canola | plasma membrane | 52.42 | 58.91 |
| PGSC0003DMT400045503 | Potato | plasma membrane | 54.41 | 58.53 |
| Bra001234.1-P | Field mustard | plasma membrane | 54.19 | 57.48 |
| Zm00001d014469_P001 | Maize | extracellular | 19.16 | 57.24 |
| CDY08016 | Canola | plasma membrane | 53.52 | 57.04 |
| CDX74064 | Canola | plasma membrane | 53.74 | 57.01 |
| Solyc09g061320.2.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane | 54.63 | 56.88 |
| CDY24649 | Canola | cytosol | 14.54 | 56.41 |
| KRH46755 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 53.74 | 55.71 |
| CDY65595 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 14.54 | 55.46 |
| AT3G07080.1 | Thale cress | plasma membrane | 53.08 | 55.02 |
| TraesCS2D01G518100.1 | Wheat | plasma membrane | 22.03 | 25.13 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G441800.2 | EnsemblPlantsGene:TraesCS7D01G441800 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:SLC35_F1/F2/F6 |
| PANTHER:PTHR23051 | PANTHER:PTHR23051:SF1 | PFAM:PF06027 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| MapMan:24.2.1.7 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:561021976..561024133
Molecular Weight (calculated)
48939.0 Da
IEP (calculated)
4.881
GRAVY (calculated)
0.381
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSAVQRDS VSAPGNMECA DDPGSSSGSR SKWGKMMSND TWRWCLGLIY IVAIAGIWIA ASYIVQSVVD GGVSPFLITY ICNSLFIVYI PIVEFARYFE
101: DSIDNLWSKL KGKDGADLQQ LADLESVNLL QRSGQEGSAA SPLSEDNLTS NAIFPIHTEL GVADCSKGLD AKGRWTRART ARVSMLVCPF WFLAQLTFNL
201: SLRYTTVTSN TILSSTSTLF TFLVALVFLG ETFTWLKLIS VLLCIAGTII VSLADSGSTL NAVATNPLLG DFLSIVSAGL YAVYITLIRK KLPDEKEGQG
301: QVSMAQFLGF LGLFNMLFFL PVALVLNFAK LEPFHTLTWE QVGLIVGKGL LDNVLSDYLW AKAILLTTTT VATAGLTIQV PIAALVDTLT GHAPQLLNYI
401: GAAAVLVGFA GINIPSNVLQ PSHHQQDQQE APIVSIVDDS HHSPSDRNST DAVS
101: DSIDNLWSKL KGKDGADLQQ LADLESVNLL QRSGQEGSAA SPLSEDNLTS NAIFPIHTEL GVADCSKGLD AKGRWTRART ARVSMLVCPF WFLAQLTFNL
201: SLRYTTVTSN TILSSTSTLF TFLVALVFLG ETFTWLKLIS VLLCIAGTII VSLADSGSTL NAVATNPLLG DFLSIVSAGL YAVYITLIRK KLPDEKEGQG
301: QVSMAQFLGF LGLFNMLFFL PVALVLNFAK LEPFHTLTWE QVGLIVGKGL LDNVLSDYLW AKAILLTTTT VATAGLTIQV PIAALVDTLT GHAPQLLNYI
401: GAAAVLVGFA GINIPSNVLQ PSHHQQDQQE APIVSIVDDS HHSPSDRNST DAVS
001: MSTKLWRWVL GLIYLFAVAT IWIAASFVVQ SVVEAGVSPF LITFICNSLF VVYLPLFEIG RYLEDAYGSL LFWRSKRSHL MELVESEKAV LLGKDVSGVK
101: SDATESSGLV VREQEISEGG NGIESGLENI ELEIDASVNV SDGASGVSNK GLDEKGRWTR MRVAKVSLVI CPFWFLAQLT FNVSLKYTTV TSNTILSSAS
201: SLFTFLVSLI FLGEKFTWLK LFSVLLCMSG TIIVSMGDSE SKSNAVAKNP LLGDILSLVS AALYAVYITL IRKKLPDDDE RNGRVSMAQF LGFLGLFNFF
301: IFLPPALILN FTKRERFNAL TLKQFGLVVG KGLLDNVLSD YLWAKAVLLT TTTVATAGLT IQVPLAAIVD SLSGNKPSFT DYIGAAAVMV GFAGINIPSE
401: MFCKSKETAI ELEPGTSFTD PPPIVPDSIR VDSSLTVV
101: SDATESSGLV VREQEISEGG NGIESGLENI ELEIDASVNV SDGASGVSNK GLDEKGRWTR MRVAKVSLVI CPFWFLAQLT FNVSLKYTTV TSNTILSSAS
201: SLFTFLVSLI FLGEKFTWLK LFSVLLCMSG TIIVSMGDSE SKSNAVAKNP LLGDILSLVS AALYAVYITL IRKKLPDDDE RNGRVSMAQF LGFLGLFNFF
301: IFLPPALILN FTKRERFNAL TLKQFGLVVG KGLLDNVLSD YLWAKAVLLT TTTVATAGLT IQVPLAAIVD SLSGNKPSFT DYIGAAAVMV GFAGINIPSE
401: MFCKSKETAI ELEPGTSFTD PPPIVPDSIR VDSSLTVV
Arabidopsis Description
At3g07080 [Source:UniProtKB/TrEMBL;Acc:Q9SFT8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.