CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65595	Canola	endoplasmic reticulum, extracellular, plasma membrane	54.42	98.32
CDY24649	Canola	cytosol	33.02	60.68
Zm00001d014470_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	59.07	47.57
CDY05314	Canola	plasma membrane	86.51	46.04
CDX74064	Canola	plasma membrane	91.63	46.03
CDY08016	Canola	plasma membrane	91.16	46.01
CDY66751	Canola	plasma membrane	75.35	42.63
AT3G07080.1	Thale cress	plasma membrane	86.51	42.47
CDY34916	Canola	plasma membrane	62.79	39.82
Zm00001d014469_P001	Maize	extracellular	25.12	35.53
PGSC0003DMT400045503	Potato	plasma membrane	65.58	33.41
Solyc09g061320.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	67.44	33.26
VIT_07s0005g06440.t01	Wine grape	plasma membrane	66.51	32.87
KRH46755	Soybean	endoplasmic reticulum, plasma membrane, vacuole	64.19	31.51
Os06t0681700-01	Rice	plasma membrane	64.65	30.89
GSMUA_Achr1P26240_001	Banana	plasma membrane	60.0	30.71
KXG20650	Sorghum	plasma membrane	63.26	29.76
GSMUA_Achr11P...	Banana	plasma membrane	60.0	29.72
Zm00001d036564_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	61.86	29.49
TraesCS7A01G452600.1	Wheat	plasma membrane	61.4	29.07
TraesCS7B01G352500.1	Wheat	plasma membrane	61.4	29.07
TraesCS7D01G441800.2	Wheat	plasma membrane	61.4	29.07
Zm00001d014468_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	61.86	28.91
HORVU7Hr1G102150.1	Barley	cytosol, nucleus	61.4	20.66
CDY23320	Canola	plasma membrane	26.51	12.9

Protein Annotations

EnsemblPlants:CDX82733	EnsemblPlantsGene:GSBRNA2T00138018001	GO:A0A078D659	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR23051	PANTHER:PTHR23051:SF1	ProteinID:CDX82733	ProteinID:CDX82733.1	SEG:seg	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0004EE3185	MapMan:24.2.1.7	:	:	:

Description

BnaC07g01330D

Coordinates

chrLK031829:-:1766518..1767506

Molecular Weight (calculated)

23107.9 Da

IEP (calculated)

4.718

GRAVY (calculated)

0.442

Length

215 amino acids

Sequence
(BLAST)

001: MRVAKVSLVI CLFWFLAQLT FNLSLKYTTV TSNTILSSSS SPFTFLVLGD SESNSTATAK NPLLGDVLSL MVFYAVYITL IRKKLPDDDE RSGRFSMAQL
101: LGLVVGKGLL DNVLSDYLWA KVVLLTTTTV ASAGLTIQVP LAAIVDSLSG NKPSFTDFIG AAAVMVGFAG INIPAEVFHR SKETSIELEP VTSFTDPPQI
201: VSDSIRVDSS ETQVS

Best Arabidopsis Sequence Match ( AT3G07080.1 )
(BLAST)

001: MSTKLWRWVL GLIYLFAVAT IWIAASFVVQ SVVEAGVSPF LITFICNSLF VVYLPLFEIG RYLEDAYGSL LFWRSKRSHL MELVESEKAV LLGKDVSGVK
101: SDATESSGLV VREQEISEGG NGIESGLENI ELEIDASVNV SDGASGVSNK GLDEKGRWTR MRVAKVSLVI CPFWFLAQLT FNVSLKYTTV TSNTILSSAS
201: SLFTFLVSLI FLGEKFTWLK LFSVLLCMSG TIIVSMGDSE SKSNAVAKNP LLGDILSLVS AALYAVYITL IRKKLPDDDE RNGRVSMAQF LGFLGLFNFF
301: IFLPPALILN FTKRERFNAL TLKQFGLVVG KGLLDNVLSD YLWAKAVLLT TTTVATAGLT IQVPLAAIVD SLSGNKPSFT DYIGAAAVMV GFAGINIPSE
401: MFCKSKETAI ELEPGTSFTD PPPIVPDSIR VDSSLTVV

Arabidopsis Description

At3g07080 [Source:UniProtKB/TrEMBL;Acc:Q9SFT8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.