Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- endoplasmic reticulum 4
- plasma membrane 5
- extracellular 3
- vacuole 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34916 | Canola | plasma membrane | 54.79 | 70.8 |
| CDY66751 | Canola | plasma membrane | 61.19 | 70.53 |
| Bra040359.1-P | Field mustard | plasma membrane | 45.89 | 67.68 |
| Zm00001d014470_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 40.41 | 66.29 |
| CDY05314 | Canola | plasma membrane | 60.96 | 66.09 |
| CDX82733 | Canola | plasma membrane | 31.51 | 64.19 |
| CDY08016 | Canola | plasma membrane | 62.33 | 64.08 |
| CDX74064 | Canola | plasma membrane | 62.33 | 63.78 |
| Bra001234.1-P | Field mustard | plasma membrane | 62.1 | 63.55 |
| PGSC0003DMT400045503 | Potato | plasma membrane | 61.19 | 63.51 |
| VIT_07s0005g06440.t01 | Wine grape | plasma membrane | 63.01 | 63.45 |
| Bra029620.1-P | Field mustard | cytosol, golgi, plastid | 22.37 | 62.82 |
| AT3G07080.1 | Thale cress | plasma membrane | 61.87 | 61.87 |
| GSMUA_Achr1P26240_001 | Banana | plasma membrane | 59.13 | 61.67 |
| Solyc09g061320.2.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane | 58.68 | 58.95 |
| CDY24649 | Canola | cytosol | 15.53 | 58.12 |
| GSMUA_Achr11P... | Banana | plasma membrane | 57.08 | 57.6 |
| KXG20650 | Sorghum | plasma membrane | 57.99 | 55.58 |
| CDY65595 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 15.07 | 55.46 |
| Zm00001d036564_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 56.62 | 54.99 |
| Os06t0681700-01 | Rice | plasma membrane | 56.39 | 54.89 |
| Zm00001d014468_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 56.85 | 54.13 |
| TraesCS7D01G441800.2 | Wheat | plasma membrane | 55.71 | 53.74 |
| TraesCS7A01G452600.1 | Wheat | plasma membrane | 55.48 | 53.52 |
| TraesCS7B01G352500.1 | Wheat | plasma membrane | 55.48 | 53.52 |
| Zm00001d014469_P001 | Maize | extracellular | 16.21 | 46.71 |
| HORVU7Hr1G102150.1 | Barley | cytosol, nucleus | 55.71 | 38.18 |
| KRH61738 | Soybean | plasma membrane | 23.06 | 25.7 |
| KRH52408 | Soybean | plasma membrane | 22.83 | 25.38 |
| KRH05344 | Soybean | plasma membrane | 22.6 | 25.32 |
| KRH15833 | Soybean | plasma membrane | 22.15 | 24.68 |
| KRH05190 | Soybean | plasma membrane | 21.92 | 24.43 |
| KRH15685 | Soybean | golgi, nucleus, plasma membrane | 18.26 | 20.67 |
Protein Annotations
| MapMan:24.2.1.7 | EMBL:ACUP02005356 | EnsemblPlantsGene:GLYMA_08G354800 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| UniProt:I1KZA3 | EnsemblPlants:KRH46755 | ProteinID:KRH46755 | ProteinID:KRH46755.1 | PFAM:PF06027 | PANTHER:PTHR23051 |
| PANTHER:PTHR23051:SF1 | InterPro:SLC35_F1/F2/F6 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0002337CBB | SEG:seg |
Description
hypothetical protein
Coordinates
chr8:+:46757821..46761598
Molecular Weight (calculated)
47542.4 Da
IEP (calculated)
4.718
GRAVY (calculated)
0.401
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSKDENSKA WKWGLGLVYI FAVATIWIAA SFVVQSVVEA GVSPFLVTYI CNSLFVVLIP IVEIGRYLED SYGSLWFWRS EKSNPHSKGR VGESEKAILL
101: KDNDAGNEAS ESLVLEEVDV IQERNNGSEL LPADKVVGVS ADQVNVIENI SNHLDEKGRW SRCRVAKVSL LICPFWFLAQ LTFNLSLKYT TVTSNTILSS
201: ASSLFTFLVS LAFLGERFTW LKLFSVLLCM AGTIIVSLGD SQSGLATVAS NPLLGDIFAL ASAGLYAVYI TLIRKKLPDD DGKSGEASTA QFLGFLGLFN
301: VLIFLPVALI LHFTKKESFS TLTWKQLGLI IGKGLLDNVL SDYLWAKAVL LTSTTVATAG LTIQVPLAAI VDTLTGNAPR FMDYLGAIAV MIGFTGINIP
401: SDTFSKSTET TVALENENLN TRTEELTLSI SQDSVAIS
101: KDNDAGNEAS ESLVLEEVDV IQERNNGSEL LPADKVVGVS ADQVNVIENI SNHLDEKGRW SRCRVAKVSL LICPFWFLAQ LTFNLSLKYT TVTSNTILSS
201: ASSLFTFLVS LAFLGERFTW LKLFSVLLCM AGTIIVSLGD SQSGLATVAS NPLLGDIFAL ASAGLYAVYI TLIRKKLPDD DGKSGEASTA QFLGFLGLFN
301: VLIFLPVALI LHFTKKESFS TLTWKQLGLI IGKGLLDNVL SDYLWAKAVL LTSTTVATAG LTIQVPLAAI VDTLTGNAPR FMDYLGAIAV MIGFTGINIP
401: SDTFSKSTET TVALENENLN TRTEELTLSI SQDSVAIS
001: MSTKLWRWVL GLIYLFAVAT IWIAASFVVQ SVVEAGVSPF LITFICNSLF VVYLPLFEIG RYLEDAYGSL LFWRSKRSHL MELVESEKAV LLGKDVSGVK
101: SDATESSGLV VREQEISEGG NGIESGLENI ELEIDASVNV SDGASGVSNK GLDEKGRWTR MRVAKVSLVI CPFWFLAQLT FNVSLKYTTV TSNTILSSAS
201: SLFTFLVSLI FLGEKFTWLK LFSVLLCMSG TIIVSMGDSE SKSNAVAKNP LLGDILSLVS AALYAVYITL IRKKLPDDDE RNGRVSMAQF LGFLGLFNFF
301: IFLPPALILN FTKRERFNAL TLKQFGLVVG KGLLDNVLSD YLWAKAVLLT TTTVATAGLT IQVPLAAIVD SLSGNKPSFT DYIGAAAVMV GFAGINIPSE
401: MFCKSKETAI ELEPGTSFTD PPPIVPDSIR VDSSLTVV
101: SDATESSGLV VREQEISEGG NGIESGLENI ELEIDASVNV SDGASGVSNK GLDEKGRWTR MRVAKVSLVI CPFWFLAQLT FNVSLKYTTV TSNTILSSAS
201: SLFTFLVSLI FLGEKFTWLK LFSVLLCMSG TIIVSMGDSE SKSNAVAKNP LLGDILSLVS AALYAVYITL IRKKLPDDDE RNGRVSMAQF LGFLGLFNFF
301: IFLPPALILN FTKRERFNAL TLKQFGLVVG KGLLDNVLSD YLWAKAVLLT TTTVATAGLT IQVPLAAIVD SLSGNKPSFT DYIGAAAVMV GFAGINIPSE
401: MFCKSKETAI ELEPGTSFTD PPPIVPDSIR VDSSLTVV
Arabidopsis Description
At3g07080 [Source:UniProtKB/TrEMBL;Acc:Q9SFT8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.