Factsheet for Solyc09g061320.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:

plastid 1
endoplasmic reticulum 2
plasma membrane 3
extracellular 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome, plasma membrane
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045503	Potato	plasma membrane	78.44	81.04
Zm00001d014470_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	42.2	68.91
CDX82733	Canola	plasma membrane	33.26	67.44
CDY66751	Canola	plasma membrane	58.72	67.37
CDY34916	Canola	plasma membrane	51.83	66.67
Bra029620.1-P	Field mustard	cytosol, golgi, plastid	23.17	64.74
VIT_07s0005g06440.t01	Wine grape	plasma membrane	64.22	64.37
Bra040359.1-P	Field mustard	plasma membrane	43.58	63.97
CDY05314	Canola	plasma membrane	58.03	62.62
Bra001234.1-P	Field mustard	plasma membrane	60.78	61.92
CDY08016	Canola	plasma membrane	59.86	61.27
CDX74064	Canola	plasma membrane	60.09	61.22
AT3G07080.1	Thale cress	plasma membrane	59.17	58.9
CDY65595	Canola	endoplasmic reticulum, extracellular, plasma membrane	16.05	58.82
KRH46755	Soybean	endoplasmic reticulum, plasma membrane, vacuole	58.95	58.68
GSMUA_Achr1P26240_001	Banana	plasma membrane	55.05	57.14
KXG20650	Sorghum	plasma membrane	58.26	55.58
Zm00001d036564_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	57.11	55.21
Zm00001d014468_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	58.03	55.0
TraesCS7B01G352500.1	Wheat	plasma membrane	56.88	54.63
TraesCS7D01G441800.2	Wheat	plasma membrane	56.88	54.63
Os06t0681700-01	Rice	plasma membrane	56.19	54.44
TraesCS7A01G452600.1	Wheat	plasma membrane	56.42	54.19
CDY24649	Canola	cytosol	14.45	53.85
GSMUA_Achr11P...	Banana	plasma membrane	52.98	53.23
Zm00001d014469_P001	Maize	extracellular	17.2	49.34
HORVU7Hr1G102150.1	Barley	cytosol, nucleus	57.11	38.97
Solyc08g021960.2.1	Tomato	plasma membrane	21.33	23.66

Protein Annotations

EnsemblPlants:Solyc09g061320.2.1	EnsemblPlantsGene:Solyc09g061320.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:SLC35_F1/F2/F6
PANTHER:PTHR23051	PANTHER:PTHR23051:SF1	PFAM:PF06027	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix
UniParc:UPI000276BB3D	UniProt:K4CTW5	MapMan:24.2.1.7	:	:	:

Description

No Description!

Coordinates

chr9:-:58658805..58662858

Molecular Weight (calculated)

47889.6 Da

IEP (calculated)

5.220

GRAVY (calculated)

0.473

Length

436 amino acids

Sequence
(BLAST)

001: MDPIIEIRAQ TIISVSIEEA QHEHVLQILR YASPGRRLRL AISAICRFVG KRMKDQSWRW VLGLVYIITV ASIWIAASFV VQSVVDAGVS PFLVTYLCNS
101: LFIVYIPFIE IVHFLEDKYG TVLFWRNNKD NTSDSPESEE VVLLDETSEQ IIDENVDMGL DAKGRWTRSR VAKVSLLICP FWFLAQLTFN LSLKYTTVTS
201: NTILSSSSSL FTFLVSLVFL GEVFTWVKLF SVLLCMGGTI IVSLGDSKSG SSKVALNPVL GDILSLVSAA MYAVYITLIR KKLPDDDGKS GHASMAQFLG
301: YLGLFNMLIF LPIPLVLNFA NLEPFNTLTW KQLGLIVGKG MFDNVLSDLL WAKAILLTST TVATAGLTIQ VPLAAIVDSL TGNAPPIMDY IGAAAVMVGF
401: AGINIPSDSC SVPKEASIEL ENGKIQSTEQ DHLSPR

Best Arabidopsis Sequence Match ( AT3G07080.1 )
(BLAST)

001: MSTKLWRWVL GLIYLFAVAT IWIAASFVVQ SVVEAGVSPF LITFICNSLF VVYLPLFEIG RYLEDAYGSL LFWRSKRSHL MELVESEKAV LLGKDVSGVK
101: SDATESSGLV VREQEISEGG NGIESGLENI ELEIDASVNV SDGASGVSNK GLDEKGRWTR MRVAKVSLVI CPFWFLAQLT FNVSLKYTTV TSNTILSSAS
201: SLFTFLVSLI FLGEKFTWLK LFSVLLCMSG TIIVSMGDSE SKSNAVAKNP LLGDILSLVS AALYAVYITL IRKKLPDDDE RNGRVSMAQF LGFLGLFNFF
301: IFLPPALILN FTKRERFNAL TLKQFGLVVG KGLLDNVLSD YLWAKAVLLT TTTVATAGLT IQVPLAAIVD SLSGNKPSFT DYIGAAAVMV GFAGINIPSE
401: MFCKSKETAI ELEPGTSFTD PPPIVPDSIR VDSSLTVV

Arabidopsis Description

At3g07080 [Source:UniProtKB/TrEMBL;Acc:Q9SFT8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.