Factsheet for Os06t0681700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
plasma membrane 4
extracellular 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014470_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	51.33	86.52
TraesCS7B01G352500.1	Wheat	plasma membrane	78.44	77.75
KXG20650	Sorghum	plasma membrane	78.67	77.46
TraesCS7D01G441800.2	Wheat	plasma membrane	78.0	77.31
Zm00001d036564_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	77.33	77.16
TraesCS7A01G452600.1	Wheat	plasma membrane	77.56	76.87
Zm00001d014468_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	76.44	74.78
CDY66751	Canola	plasma membrane	55.11	65.26
CDX82733	Canola	plasma membrane	30.89	64.65
CDY34916	Canola	plasma membrane	48.44	64.31
GSMUA_Achr11P...	Banana	plasma membrane	60.89	63.13
GSMUA_Achr1P26240_001	Banana	plasma membrane	58.44	62.62
Bra029620.1-P	Field mustard	cytosol, golgi, plastid	21.56	62.18
VIT_07s0005g06440.t01	Wine grape	plasma membrane	60.0	62.07
Bra040359.1-P	Field mustard	plasma membrane	40.89	61.95
CDY05314	Canola	plasma membrane	54.89	61.14
Bra001234.1-P	Field mustard	plasma membrane	56.67	59.58
CDX74064	Canola	plasma membrane	56.67	59.58
CDY08016	Canola	plasma membrane	56.0	59.15
PGSC0003DMT400045503	Potato	plasma membrane	55.11	58.77
AT3G07080.1	Thale cress	plasma membrane	56.44	57.99
CDY65595	Canola	endoplasmic reticulum, extracellular, plasma membrane	15.33	57.98
KRH46755	Soybean	endoplasmic reticulum, plasma membrane, vacuole	54.89	56.39
Solyc09g061320.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	54.44	56.19
HORVU7Hr1G102150.1	Barley	cytosol, nucleus	79.33	55.87
CDY24649	Canola	cytosol	14.44	55.56
Zm00001d014469_P001	Maize	extracellular	18.44	54.61
Os04t0645600-01	Rice	plasma membrane	22.0	25.0

Protein Annotations

MapMan:24.2.1.7	EntrezGene:4341862	ProteinID:BAD45895.1	ProteinID:BAF20294.1	ProteinID:BAS99156.1	ProteinID:EAZ38043.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:Os06g0681700	EnsemblPlants:Os06t0681700-01	PFAM:PF06027
PANTHER:PTHR23051	PANTHER:PTHR23051:SF1	UniProt:Q653X2	InterPro:SLC35_F1/F2/F6	SUPFAM:SSF103481	TMHMM:TMhelix
UniParc:UPI000043A447	RefSeq:XP_015644464.1	SEG:seg	:	:	:

Description

Protein of unknown function DUF6, transmembrane domain containing protein. (Os06t0681700-01)

Coordinates

chr6:+:28426960..28430241

Molecular Weight (calculated)

48865.1 Da

IEP (calculated)

4.500

GRAVY (calculated)

0.399

Length

450 amino acids

Sequence
(BLAST)

001: MKVDDGPGVN GSRWAKMMST DSWRWCLGLI YIVAVASIWI AASYIVQSVV DEGVSPFLIT YICNSLFVIY IPIVEAARYF EDSINNFWTK LKGKDVADLE
101: QSADLESINL LHGSEQEGNT ASPTRLPEDI LASEAVFPVQ AELNVADGSK GLDAKGRWTR ARVARVSMVV CPFWFLAQLT FNLSLRYTTV TSNTILSSTS
201: SLFTFLVALV FLGETFTWLK LISVLLCMGG TIIVSLADSG STANTIATNP LLGDVLSIVS AGLYAVYITL IRKKLPDEKE GQGEVSMAQF LGFLGLFNML
301: FFFPFALFLN FTKLEPFHRL TWEQVGLIVG KGLLDNVLSD YLWAKAILLT TTTVATAGLT IQVPIAAIVD TLTGHAPHLL DYIGAAAVLV GFAGINIPVG
401: TPQGSQQEQE TPIVSMVDDP VHLPSDRNAT SMVDDPVYLP SDRNATGAVQ

Best Arabidopsis Sequence Match ( AT3G07080.1 )
(BLAST)

001: MSTKLWRWVL GLIYLFAVAT IWIAASFVVQ SVVEAGVSPF LITFICNSLF VVYLPLFEIG RYLEDAYGSL LFWRSKRSHL MELVESEKAV LLGKDVSGVK
101: SDATESSGLV VREQEISEGG NGIESGLENI ELEIDASVNV SDGASGVSNK GLDEKGRWTR MRVAKVSLVI CPFWFLAQLT FNVSLKYTTV TSNTILSSAS
201: SLFTFLVSLI FLGEKFTWLK LFSVLLCMSG TIIVSMGDSE SKSNAVAKNP LLGDILSLVS AALYAVYITL IRKKLPDDDE RNGRVSMAQF LGFLGLFNFF
301: IFLPPALILN FTKRERFNAL TLKQFGLVVG KGLLDNVLSD YLWAKAVLLT TTTVATAGLT IQVPLAAIVD SLSGNKPSFT DYIGAAAVMV GFAGINIPSE
401: MFCKSKETAI ELEPGTSFTD PPPIVPDSIR VDSSLTVV

Arabidopsis Description

At3g07080 [Source:UniProtKB/TrEMBL;Acc:Q9SFT8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.