Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001234.1-P | Field mustard | plasma membrane | 95.54 | 95.09 |
| CDX74064 | Canola | plasma membrane | 95.31 | 94.86 |
| CDX82733 | Canola | plasma membrane | 46.01 | 91.16 |
| CDY65595 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 24.88 | 89.08 |
| AT3G07080.1 | Thale cress | plasma membrane | 86.39 | 84.02 |
| CDY05314 | Canola | plasma membrane | 78.64 | 82.92 |
| CDY66751 | Canola | plasma membrane | 73.94 | 82.89 |
| CDY34916 | Canola | plasma membrane | 65.26 | 82.01 |
| Zm00001d014470_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 42.96 | 68.54 |
| VIT_07s0005g06440.t01 | Wine grape | plasma membrane | 66.43 | 65.06 |
| CDY24649 | Canola | cytosol | 17.37 | 63.25 |
| KRH46755 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 64.08 | 62.33 |
| PGSC0003DMT400045503 | Potato | plasma membrane | 61.5 | 62.09 |
| Solyc09g061320.2.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane | 61.27 | 59.86 |
| GSMUA_Achr1P26240_001 | Banana | plasma membrane | 56.81 | 57.62 |
| GSMUA_Achr11P... | Banana | plasma membrane | 58.22 | 57.14 |
| KXG20650 | Sorghum | plasma membrane | 60.8 | 56.67 |
| Os06t0681700-01 | Rice | plasma membrane | 59.15 | 56.0 |
| Zm00001d036564_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 58.92 | 55.65 |
| Zm00001d014468_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 59.86 | 55.43 |
| Zm00001d014469_P001 | Maize | extracellular | 19.25 | 53.95 |
| TraesCS7D01G441800.2 | Wheat | plasma membrane | 57.04 | 53.52 |
| TraesCS7B01G352500.1 | Wheat | plasma membrane | 56.81 | 53.3 |
| TraesCS7A01G452600.1 | Wheat | plasma membrane | 56.57 | 53.08 |
| HORVU7Hr1G102150.1 | Barley | cytosol, nucleus | 57.04 | 38.03 |
| CDY23320 | Canola | plasma membrane | 23.47 | 22.62 |
Protein Annotations
| MapMan:24.2.1.7 | GO:A0A078F3V8 | UniProt:A0A078F3V8 | EnsemblPlants:CDY08016 | ProteinID:CDY08016 | ProteinID:CDY08016.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00125260001 | PFAM:PF06027 | PANTHER:PTHR23051 |
| PANTHER:PTHR23051:SF1 | InterPro:SLC35_F1/F2/F6 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EDDC20 | SEG:seg |
Description
BnaC03g35070DBnaC03g35070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F3V8]
Coordinates
chrLK031982:-:638554..640212
Molecular Weight (calculated)
46284.3 Da
IEP (calculated)
4.700
GRAVY (calculated)
0.511
Length
426 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSKVWRWVI GLTYILAVAM IWIAASFVVQ SVVDAGVSPF LITFICNSLF VVYLPLFEIG RYLEDAYGSI LFWRSKRSHL LELVESEKDV LLGQGGVVSS
101: DLSEGSGVVV ASEEGGSGIE SGVESVELEV NVSGENKGLD EKGRWTRMRV AKVSLVICPF WFLAQLTFNL SLKYTTVTSN TILSSSSSLF TFLVSLIFLG
201: EKFTWLKLFS VLLCMSGTII VSLGDSESNS TATAKNPLLG DVLSLLSAAF YAVYITLIRK KLPDDDEKNG RFSMAQLLGF LGLFNFFIFL PVALILNFTK
301: RERFNSLTLK QLGLVVGKGL LDNVLSDYLW AKAVLLTTTT VATAGLTIQV PLAAIVDTLA GNKPSFTDYI GAAAVMVGFA GINIPAEMFC RSKETCIELE
401: PGTSFTDPPP FVSDSIRVDS SETLAS
101: DLSEGSGVVV ASEEGGSGIE SGVESVELEV NVSGENKGLD EKGRWTRMRV AKVSLVICPF WFLAQLTFNL SLKYTTVTSN TILSSSSSLF TFLVSLIFLG
201: EKFTWLKLFS VLLCMSGTII VSLGDSESNS TATAKNPLLG DVLSLLSAAF YAVYITLIRK KLPDDDEKNG RFSMAQLLGF LGLFNFFIFL PVALILNFTK
301: RERFNSLTLK QLGLVVGKGL LDNVLSDYLW AKAVLLTTTT VATAGLTIQV PLAAIVDTLA GNKPSFTDYI GAAAVMVGFA GINIPAEMFC RSKETCIELE
401: PGTSFTDPPP FVSDSIRVDS SETLAS
001: MSTKLWRWVL GLIYLFAVAT IWIAASFVVQ SVVEAGVSPF LITFICNSLF VVYLPLFEIG RYLEDAYGSL LFWRSKRSHL MELVESEKAV LLGKDVSGVK
101: SDATESSGLV VREQEISEGG NGIESGLENI ELEIDASVNV SDGASGVSNK GLDEKGRWTR MRVAKVSLVI CPFWFLAQLT FNVSLKYTTV TSNTILSSAS
201: SLFTFLVSLI FLGEKFTWLK LFSVLLCMSG TIIVSMGDSE SKSNAVAKNP LLGDILSLVS AALYAVYITL IRKKLPDDDE RNGRVSMAQF LGFLGLFNFF
301: IFLPPALILN FTKRERFNAL TLKQFGLVVG KGLLDNVLSD YLWAKAVLLT TTTVATAGLT IQVPLAAIVD SLSGNKPSFT DYIGAAAVMV GFAGINIPSE
401: MFCKSKETAI ELEPGTSFTD PPPIVPDSIR VDSSLTVV
101: SDATESSGLV VREQEISEGG NGIESGLENI ELEIDASVNV SDGASGVSNK GLDEKGRWTR MRVAKVSLVI CPFWFLAQLT FNVSLKYTTV TSNTILSSAS
201: SLFTFLVSLI FLGEKFTWLK LFSVLLCMSG TIIVSMGDSE SKSNAVAKNP LLGDILSLVS AALYAVYITL IRKKLPDDDE RNGRVSMAQF LGFLGLFNFF
301: IFLPPALILN FTKRERFNAL TLKQFGLVVG KGLLDNVLSD YLWAKAVLLT TTTVATAGLT IQVPLAAIVD SLSGNKPSFT DYIGAAAVMV GFAGINIPSE
401: MFCKSKETAI ELEPGTSFTD PPPIVPDSIR VDSSLTVV
Arabidopsis Description
At3g07080 [Source:UniProtKB/TrEMBL;Acc:Q9SFT8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.