Factsheet for Bra040359.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34916	Canola	plasma membrane	94.95	83.19
Bra001234.1-P	Field mustard	plasma membrane	82.83	57.48
AT3G07080.1	Thale cress	plasma membrane	82.49	55.94
Bra029620.1-P	Field mustard	cytosol, golgi, plastid	29.29	55.77
Zm00001d014469_P001	Maize	extracellular	25.25	49.34
VIT_07s0005g06440.t01	Wine grape	plasma membrane	70.03	47.82
KRH46755	Soybean	endoplasmic reticulum, plasma membrane, vacuole	67.68	45.89
PGSC0003DMT400045503	Potato	plasma membrane	64.98	45.73
Solyc09g061320.2.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	63.97	43.58
Zm00001d014470_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	38.72	43.07
GSMUA_Achr11P...	Banana	plasma membrane	61.28	41.94
GSMUA_Achr1P26240_001	Banana	plasma membrane	57.91	40.95
Os06t0681700-01	Rice	plasma membrane	61.95	40.89
KXG20650	Sorghum	plasma membrane	62.29	40.48
Zm00001d014468_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	62.29	40.22
Zm00001d036564_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	60.94	40.13
TraesCS7D01G441800.2	Wheat	plasma membrane	59.93	39.21
TraesCS7A01G452600.1	Wheat	plasma membrane	59.6	38.99
TraesCS7B01G352500.1	Wheat	plasma membrane	59.6	38.99
HORVU7Hr1G102150.1	Barley	cytosol, nucleus	60.27	28.01
Bra040066.1-P	Field mustard	plasma membrane	24.58	16.55

Protein Annotations

EnsemblPlants:Bra040359.1	EnsemblPlants:Bra040359.1-P	EnsemblPlantsGene:Bra040359	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR23051	PANTHER:PTHR23051:SF1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002544935	UniProt:M4FGY1
MapMan:24.2.1.7	:	:	:	:	:

Description

AT3G07080 (E=2e-047) | membrane protein

Coordinates

chrA01:-:28009874..28011488

Molecular Weight (calculated)

32846.9 Da

IEP (calculated)

4.629

GRAVY (calculated)

0.490

Length

297 amino acids

Sequence
(BLAST)

001: MSGEVWRWVL GLTYILAVAT IWIASSFVVQ SVVDAGVSPF LITFICNSLF VVYLPIFEIS RYLEDSYGSS ILFWRNKRSH LLELAESEKT VLLGQDVVIS
101: DASEVSRVVV REDANGLDEK GRWTRMRVAK VSLLICPFWF LAQLTFNLSL KYTTVTLPDD DERSGSFSMA QLLGFLGLFN FFIFLPAAII LNFTKRERFN
201: ALTLEQFGLV VGKGLLDNVL SDYLWAKAVL LTTTTVATAG LTIQVPLAAI VDRLSGNKPS FTDYIGAAAV MVGFAGINIP SESKETAIEL EPETLVS

Best Arabidopsis Sequence Match ( AT3G07080.1 )
(BLAST)

001: MSTKLWRWVL GLIYLFAVAT IWIAASFVVQ SVVEAGVSPF LITFICNSLF VVYLPLFEIG RYLEDAYGSL LFWRSKRSHL MELVESEKAV LLGKDVSGVK
101: SDATESSGLV VREQEISEGG NGIESGLENI ELEIDASVNV SDGASGVSNK GLDEKGRWTR MRVAKVSLVI CPFWFLAQLT FNVSLKYTTV TSNTILSSAS
201: SLFTFLVSLI FLGEKFTWLK LFSVLLCMSG TIIVSMGDSE SKSNAVAKNP LLGDILSLVS AALYAVYITL IRKKLPDDDE RNGRVSMAQF LGFLGLFNFF
301: IFLPPALILN FTKRERFNAL TLKQFGLVVG KGLLDNVLSD YLWAKAVLLT TTTVATAGLT IQVPLAAIVD SLSGNKPSFT DYIGAAAVMV GFAGINIPSE
401: MFCKSKETAI ELEPGTSFTD PPPIVPDSIR VDSSLTVV

Arabidopsis Description

At3g07080 [Source:UniProtKB/TrEMBL;Acc:Q9SFT8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.