Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- extracellular 3
- mitochondrion 1
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0124g00230.t01 | Wine grape | cytosol | 18.53 | 33.61 |
| VIT_18s0041g01100.t01 | Wine grape | cytosol | 8.58 | 23.05 |
| VIT_18s0041g01090.t01 | Wine grape | cytosol | 13.78 | 22.67 |
Protein Annotations
| Gene3D:1.20.1280.50 | EntrezGene:100254972 | wikigene:100254972 | MapMan:19.2.2.8.1.4.6 | ProteinID:CCB61574 | ProteinID:CCB61574.1 |
| InterPro:F-box-assoc_interact_dom | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | UniProt:F6I3Q6 | EMBL:FN596743 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0031146 | InterPro:Gal_Oxase/kelch_b-propeller | InterPro:IPR001810 | EntrezGene:LOC100254972 | wikigene:LOC100254972 | PFAM:PF12937 |
| PFscan:PS50181 | PANTHER:PTHR44355 | SMART:SM00256 | SUPFAM:SSF50965 | SUPFAM:SSF81383 | TIGRFAMs:TIGR01640 |
| UniParc:UPI000210AAC5 | ArrayExpress:VIT_05s0124g00010 | EnsemblPlantsGene:VIT_05s0124g00010 | EnsemblPlants:VIT_05s0124g00010.t01 | RefSeq:XP_002267552 | RefSeq:XP_002267552.2 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:-:20346173..20353316
Molecular Weight (calculated)
72733.2 Da
IEP (calculated)
5.655
GRAVY (calculated)
-0.681
Length
653 amino acids
Sequence
(BLAST)
(BLAST)
001: MTYIPEVIMV DILSRLPVKS LLRFRCVCKA WCTLISHPQF VETHLRQQHK RPVIGLVVPH SVDDPLHKDD LAVDLELHLG IPNKRTTTVL DSCNGLLCVV
101: DCYYGFYSLK PPQKLILWNP STRQCNHIPC PSFVGYQNCM YSFFYDPGSD DYKIVRIFTF LGKDKTGIDI FTLKTNKWRR VEETHSSVIG YWSATYFNGN
201: LHWLAFRYGG YGEDERSSMV AFSLREEKFQ EMELPSQRAV FGLRVLGGCL CVDGLYTNDK WVMEEYGIKE SWKSLIAIPY RVGDGSSWKL PRVLRFLENG
301: VLLVLHDGKF RNTNSAGGMY RPSSYSSSGG YGDRYDDDRY EGRYGRDEDR NGYGREREWG SRDDDRYGRN GDSYGPEGDR YGRDSDERYG RDGYKDDDYR
401: GRSRRNEDYQ YGSRSRSADR DRDRAFDEES NHSSRGGART NEHPQYGRQL ERKFSEQNLD APPSYEEAVA DAHSPVHDER DGATPAAPAP KTSSPPVSTS
501: PSQATTAVGP STSPPANKEV DAFDEFDPRG PVSAVPATSI SPEMDLLGSL SESFSSNSLA LVPSGPATTT SEAAVLGNAG SAPASAAMPS GSAVMSQSFE
601: DPFGDSPFRA LPSAESVPAQ PQDSASTTSF QTMNQTSGPP FPVNPRSGHG FQL
101: DCYYGFYSLK PPQKLILWNP STRQCNHIPC PSFVGYQNCM YSFFYDPGSD DYKIVRIFTF LGKDKTGIDI FTLKTNKWRR VEETHSSVIG YWSATYFNGN
201: LHWLAFRYGG YGEDERSSMV AFSLREEKFQ EMELPSQRAV FGLRVLGGCL CVDGLYTNDK WVMEEYGIKE SWKSLIAIPY RVGDGSSWKL PRVLRFLENG
301: VLLVLHDGKF RNTNSAGGMY RPSSYSSSGG YGDRYDDDRY EGRYGRDEDR NGYGREREWG SRDDDRYGRN GDSYGPEGDR YGRDSDERYG RDGYKDDDYR
401: GRSRRNEDYQ YGSRSRSADR DRDRAFDEES NHSSRGGART NEHPQYGRQL ERKFSEQNLD APPSYEEAVA DAHSPVHDER DGATPAAPAP KTSSPPVSTS
501: PSQATTAVGP STSPPANKEV DAFDEFDPRG PVSAVPATSI SPEMDLLGSL SESFSSNSLA LVPSGPATTT SEAAVLGNAG SAPASAAMPS GSAVMSQSFE
601: DPFGDSPFRA LPSAESVPAQ PQDSASTTSF QTMNQTSGPP FPVNPRSGHG FQL
0001: MKKAFGQTVR DLKRGVNKKV LKVPGIEQKV LDATSNESWG PHGSLLADIA HASRNYHEYQ ITMGVLWKRL SDSGKNWRHV YKALTVLEYM VGHGSERVIE
0101: EVKEHAYQIT TLSGFQYIDS SGKDQGSNVR KKAQSLVALV NDKERITEVR EKAAANRDKY HNSMHRPSGG YGDKYDYEGR YGDRDEGRSS YGKEREYGYR
0201: DDDRNSRDGD RYSRDSEDRY GRDGNTDDEY RGRSRSVDNY NGSRGRSSDR ERPIEDDGQS SSRDSGAPAD DHSQDGRGGL ERKFSEQNIG AAPPSYEEAV
0301: SESRSPVYSE RDGGETPQVA PPGAAASPLA ENISVDNKAA DFVNESSPQQ VEAFDEFDPR GSVSAACAPT AGASVPAPIP PTVVSTPAPP ASINAEMDLL
0401: GSLSDVFSPN PLAIVTSDST SVETNGQANT GLAPSFSTSQ SSTQPFDDPF GDSPFKAITS ADTETSQHQS FGVPFQPTPP TSNPNNEHNF GFGEAFSAVT
0501: DSEPGVQNMQ APPNLSVFPQ EQFDTSQSEI DILAGILPPS GPPVSLSPQP DSTMPTSQFH PNGNSYESYH HQAAPTDLNM QGQTPFGQAS QQFNMVSHSQ
0601: NHHEGMQFNN GGFTQQPGYA GPATSQPPQY TPGVSSHPPS ESFPHQPGSA TSASSQTPYA TTPNVSAGQF DGGSFMTQQP YGVTQQVHVV PSHIPQRTQS
0701: GPVAAFGNNN NIVGDMHQPG STPSSSSQTP YPTTPNAPSG QFDGGNFMTQ QPYGVIPQVH GVPSHIPQRT QSGPVAAHGN SNNVVGDMFS PAGLSSLETS
0801: ASQPSLTPLT GAIEIVPQNQ KKFEPKSTIW ADTLSRGLVN FNISGPKTNP LADIGVDFEA INRKEKRLEK PTITQQQVTS TINMGKAMGS GTGLGRAGAG
0901: AMRPPTNSMV GSSMPTGMNV GGYGGMNQHQ PIGMNQNHPM GMNQNLSMGM NQNYPMGMNQ NYPMGMGMNM NMGGYGQGYP MQPQQGMGMA PPGAPQGMTG
1001: AYNPMMGQGG YNPQQQQPYG GGYR
0101: EVKEHAYQIT TLSGFQYIDS SGKDQGSNVR KKAQSLVALV NDKERITEVR EKAAANRDKY HNSMHRPSGG YGDKYDYEGR YGDRDEGRSS YGKEREYGYR
0201: DDDRNSRDGD RYSRDSEDRY GRDGNTDDEY RGRSRSVDNY NGSRGRSSDR ERPIEDDGQS SSRDSGAPAD DHSQDGRGGL ERKFSEQNIG AAPPSYEEAV
0301: SESRSPVYSE RDGGETPQVA PPGAAASPLA ENISVDNKAA DFVNESSPQQ VEAFDEFDPR GSVSAACAPT AGASVPAPIP PTVVSTPAPP ASINAEMDLL
0401: GSLSDVFSPN PLAIVTSDST SVETNGQANT GLAPSFSTSQ SSTQPFDDPF GDSPFKAITS ADTETSQHQS FGVPFQPTPP TSNPNNEHNF GFGEAFSAVT
0501: DSEPGVQNMQ APPNLSVFPQ EQFDTSQSEI DILAGILPPS GPPVSLSPQP DSTMPTSQFH PNGNSYESYH HQAAPTDLNM QGQTPFGQAS QQFNMVSHSQ
0601: NHHEGMQFNN GGFTQQPGYA GPATSQPPQY TPGVSSHPPS ESFPHQPGSA TSASSQTPYA TTPNVSAGQF DGGSFMTQQP YGVTQQVHVV PSHIPQRTQS
0701: GPVAAFGNNN NIVGDMHQPG STPSSSSQTP YPTTPNAPSG QFDGGNFMTQ QPYGVIPQVH GVPSHIPQRT QSGPVAAHGN SNNVVGDMFS PAGLSSLETS
0801: ASQPSLTPLT GAIEIVPQNQ KKFEPKSTIW ADTLSRGLVN FNISGPKTNP LADIGVDFEA INRKEKRLEK PTITQQQVTS TINMGKAMGS GTGLGRAGAG
0901: AMRPPTNSMV GSSMPTGMNV GGYGGMNQHQ PIGMNQNHPM GMNQNLSMGM NQNYPMGMNQ NYPMGMGMNM NMGGYGQGYP MQPQQGMGMA PPGAPQGMTG
1001: AYNPMMGQGG YNPQQQQPYG GGYR
Arabidopsis Description
EPSIN3Clathrin interactor EPSIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q93YP4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.