Factsheet for VIT_08s0058g00820.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 2
endoplasmic reticulum 1
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0067g02210.t01	Wine grape	extracellular	78.89	78.89
GSMUA_Achr10P...	Banana	cytosol	76.12	76.12
GSMUA_Achr11P...	Banana	cytosol	74.05	74.05
GSMUA_Achr5P00900_001	Banana	cytosol	73.01	73.01
TraesCS7A01G292400.1	Wheat	golgi	68.17	68.17
Os08t0282400-01	Rice	plasma membrane	67.82	67.82
KRH40815	Soybean	cytosol	67.82	67.59
TraesCS7D01G284600.1	Wheat	cytosol	68.17	65.45
TraesCS7B01G182700.2	Wheat	cytosol	67.47	64.78
Zm00001d033092_P001	Maize	cytosol	62.98	62.98
Zm00001d049982_P005	Maize	cytosol	69.9	58.05
TraesCS7B01G340300.1	Wheat	cytosol	56.75	55.97

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100255032	wikigene:100255032	MapMan:35.1	EMBL:AM478963	ProteinID:CAN72953
ProteinID:CAN72953.1	ProteinID:CBI18077	ProteinID:CBI18077.3	UniProt:D7SR32	EMBL:FN594967	GO:GO:0003674
GO:GO:0005483	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0019905	GO:GO:0031201	GO:GO:0035494
GO:GO:0061025	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	EntrezGene:LOC100255032	wikigene:LOC100255032
InterPro:NSF_attach	PFAM:PF14938	PRINTS:PR00448	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR13768
PANTHER:PTHR13768:SF8	SUPFAM:SSF48452	TIGR:TC55051	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
UniParc:UPI00015CC2A3	ArrayExpress:VIT_08s0058g00820	EnsemblPlantsGene:VIT_08s0058g00820	EnsemblPlants:VIT_08s0058g00820.t01	unigene:Vvi.9279	RefSeq:XP_002266242
RefSeq:XP_002266242.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr8:-:10017277..10027206

Molecular Weight (calculated)

32592.5 Da

IEP (calculated)

4.814

GRAVY (calculated)

-0.474

Length

289 amino acids

Sequence
(BLAST)

001: MADHITKGEE FEKKAEKKLS GWGLFGSKYE DAAELYEKAA NSFKLAKSWD KAGSINIKLA NCHLKLDSKH EAANAYADAA NCYKKTSNKE AIACLEQAAA
101: IFLEIGRLNM AARYYKEIGE LYEVDQNLQQ AIEKFDQAAE LFQSEEVTTS ANQCRQKVAQ FSAQLEQYPK AIEIYEEIAR QSLNNNLLKY GVRGHLLNAG
201: LCQLCKGDVV AITNSLERYQ ELDPTFSRTR EYKLLADLAV AVDEEDVAKF TDVVKEFDSM TPLDAWKTTL LLRVKESLKA KELEEDDLT

Best Arabidopsis Sequence Match ( AT3G56190.1 )
(BLAST)

001: MGDHLVRAEE FEKKAEKKLN GWGIFGSKYE DAADLLEKAA NSYKLAKSWD QAGKAYLKLA DCHLKSDSKH DAANAYAEAA KCYKKVDTNE AASCLERAVN
101: IFCEIGRLNM AARYYKEIAE YYESDQKFEQ AIAYFEKAAE FFQNEEVTTS ANQCNLKVAQ YAAQLEQYEK AIKIYEDIAR HSLNNNLLKY GVKGHLLTAG
201: MCHLCKADVV SITNALEKYQ DLDPTFTGTR ECKFLADLAS AIDEEDIAKF TDVVKEFDSM TPLDSWKTTM LLRVKEKLKA KELEEDDLT

Arabidopsis Description

ASNAP2At3g56190 [Source:UniProtKB/TrEMBL;Acc:Q29Q46]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.