Factsheet for GSMUA_Achr5P00900_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 2
endoplasmic reticulum 1
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	89.27	89.27
GSMUA_Achr10P...	Banana	cytosol	89.27	89.27
Solyc06g050770.2.1	Tomato	plastid	73.7	73.7
EES13745	Sorghum	cytosol	73.36	73.36
VIT_08s0058g00820.t01	Wine grape	cytosol	73.01	73.01
PGSC0003DMT400046100	Potato	cytosol	73.01	73.01
KRG97663	Soybean	endoplasmic reticulum	71.97	71.97
KRH31211	Soybean	endoplasmic reticulum, nucleus, plasma membrane	71.63	71.63
Os08t0282400-01	Rice	plasma membrane	71.28	71.28
TraesCS7A01G292400.1	Wheat	golgi	70.59	70.59
PGSC0003DMT400030420	Potato	cytosol	70.24	70.24
VIT_13s0067g02210.t01	Wine grape	extracellular	69.9	69.9
Solyc05g052310.2.1	Tomato	plastid	57.79	68.72
TraesCS7D01G284600.1	Wheat	cytosol	70.59	67.77
TraesCS7B01G182700.2	Wheat	cytosol	69.9	67.11
KRH14886	Soybean	endoplasmic reticulum	66.44	66.44
KRH73230	Soybean	cytosol	66.44	66.44
Zm00001d033092_P001	Maize	cytosol	66.44	66.44
AT3G56190.1	Thale cress	cytosol	66.44	66.44
CDX76057	Canola	cytosol	66.09	65.41
CDY27237	Canola	cytosol	65.4	65.4
CDX72160	Canola	cytosol	65.4	65.4
Bra007224.1-P	Field mustard	cytosol	65.4	65.4
Bra014705.1-P	Field mustard	cytosol	65.74	65.07
CDX67637	Canola	cytosol	65.05	65.05
Bra003231.1-P	Field mustard	cytosol	65.05	65.05
CDY62813	Canola	cytosol	64.01	63.36
CDY32002	Canola	cytosol	59.52	62.09
OQU91434	Sorghum	cytosol	62.28	62.07
Zm00001d049982_P005	Maize	cytosol	73.7	61.21
KRH40815	Soybean	cytosol	59.17	58.97
TraesCS7B01G340300.1	Wheat	cytosol	57.44	56.66
PGSC0003DMT400074763	Potato	cytosol	9.69	50.91
PGSC0003DMT400089090	Potato	cytosol	50.17	47.23
PGSC0003DMT400043844	Potato	cytosol	32.53	45.19
AT3G56450.1	Thale cress	cytosol	43.94	33.33

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150
EnsemblPlantsGene:GSMUA_Achr5G00900_001	EnsemblPlants:GSMUA_Achr5P00900_001	EnsemblPlants:GSMUA_Achr5T00900_001	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
UniProt:M0SUL9	InterPro:NSF_attach	PFAM:PF14938	PRINTS:PR00448	PFscan:PS50005	PFscan:PS50293
PANTHER:PTHR13768	PANTHER:PTHR13768:SF8	SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_repeat	UniParc:UPI000295C86A	SEG:seg	:	:	:

Description

Alpha-soluble NSF attachment protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G00900_001]

Coordinates

chr5:+:528730..535429

Molecular Weight (calculated)

32458.1 Da

IEP (calculated)

4.558

GRAVY (calculated)

-0.492

Length

289 amino acids

Sequence
(BLAST)

001: MADQTAKGDE LEQKAEKTLG GWGIFGNKYD DAAELFDKAA NCFKLAKNWE RAGSVYFKLA DCHLKLDSTH EAASAYVDAA NCYKKISIQD ATQSLNQAVK
101: LFLEIGRLNM AARYYKELGE LNEQEQNLEN AMDYFERAAD LFQSEEVTTS ANQCKQKVAQ FAAQMEQYPK AIEIYEALAR HSVNNSLLRY GVKGILLNAG
201: ICHLCKGDVV AITNALERYQ EIDPTFSGTR EYKLLADLAD SMDEGDVAKF TDAAQEYDSM TRLDSWKTTL LLRVKNAIKA KEEEEDDLT

Best Arabidopsis Sequence Match ( AT3G56190.1 )
(BLAST)

001: MGDHLVRAEE FEKKAEKKLN GWGIFGSKYE DAADLLEKAA NSYKLAKSWD QAGKAYLKLA DCHLKSDSKH DAANAYAEAA KCYKKVDTNE AASCLERAVN
101: IFCEIGRLNM AARYYKEIAE YYESDQKFEQ AIAYFEKAAE FFQNEEVTTS ANQCNLKVAQ YAAQLEQYEK AIKIYEDIAR HSLNNNLLKY GVKGHLLTAG
201: MCHLCKADVV SITNALEKYQ DLDPTFTGTR ECKFLADLAS AIDEEDIAKF TDVVKEFDSM TPLDSWKTTM LLRVKEKLKA KELEEDDLT

Arabidopsis Description

ASNAP2At3g56190 [Source:UniProtKB/TrEMBL;Acc:Q29Q46]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.