Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G56190.1 | Thale cress | cytosol | 46.98 | 61.94 |
| Bra003231.1-P | Field mustard | cytosol | 45.67 | 60.21 |
| CDX67637 | Canola | cytosol | 45.67 | 60.21 |
| Bra007224.1-P | Field mustard | cytosol | 44.88 | 59.17 |
| CDY27237 | Canola | cytosol | 44.88 | 59.17 |
| CDX72160 | Canola | cytosol | 44.62 | 58.82 |
| Bra014705.1-P | Field mustard | cytosol | 43.83 | 57.19 |
| CDX76057 | Canola | cytosol | 43.83 | 57.19 |
| CDY62813 | Canola | cytosol | 43.57 | 56.85 |
| CDY32002 | Canola | cytosol | 40.16 | 55.23 |
| KRG97663 | Soybean | endoplasmic reticulum | 38.06 | 50.17 |
| KRH31211 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 37.53 | 49.48 |
| KRH73230 | Soybean | cytosol | 37.27 | 49.13 |
| Solyc06g050770.2.1 | Tomato | plastid | 37.01 | 48.79 |
| PGSC0003DMT400046100 | Potato | cytosol | 37.01 | 48.79 |
| KRH14886 | Soybean | endoplasmic reticulum | 36.75 | 48.44 |
| VIT_13s0067g02210.t01 | Wine grape | extracellular | 35.43 | 46.71 |
| Solyc05g052310.2.1 | Tomato | plastid | 29.4 | 46.09 |
| PGSC0003DMT400030420 | Potato | cytosol | 34.91 | 46.02 |
| GSMUA_Achr11P... | Banana | cytosol | 34.65 | 45.67 |
| GSMUA_Achr10P... | Banana | cytosol | 33.86 | 44.64 |
| EER96420 | Sorghum | cytosol | 7.61 | 44.62 |
| GSMUA_Achr5P00900_001 | Banana | cytosol | 33.33 | 43.94 |
| PGSC0003DMT400074763 | Potato | cytosol | 6.04 | 41.82 |
| Os08t0282400-01 | Rice | plasma membrane | 29.92 | 39.45 |
| TraesCS7A01G292400.1 | Wheat | golgi | 29.4 | 38.75 |
| Zm00001d033092_P001 | Maize | cytosol | 28.87 | 38.06 |
| PGSC0003DMT400089090 | Potato | cytosol | 30.45 | 37.78 |
| TraesCS7B01G182700.2 | Wheat | cytosol | 29.4 | 37.21 |
| TraesCS7D01G284600.1 | Wheat | cytosol | 29.4 | 37.21 |
| PGSC0003DMT400043844 | Potato | cytosol | 18.37 | 33.65 |
| Zm00001d049982_P005 | Maize | cytosol | 30.45 | 33.33 |
| TraesCS7B01G340300.1 | Wheat | cytosol | 23.62 | 30.72 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:824812 | ProteinID:AEE79523.1 | Symbol:ALPHA-SNAP1 | ArrayExpress:AT3G56450 |
| EnsemblPlantsGene:AT3G56450 | RefSeq:AT3G56450 | TAIR:AT3G56450 | RefSeq:AT3G56450-TAIR-G | EnsemblPlants:AT3G56450.1 | TAIR:AT3G56450.1 |
| ProteinID:CAB88048.1 | GO:GO:0003674 | GO:GO:0005483 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016192 | GO:GO:0019905 | GO:GO:0031201 | GO:GO:0035494 | GO:GO:0061025 |
| InterPro:IPR011990 | RefSeq:NP_191204.1 | InterPro:NSF_attach | PFAM:PF14938 | PO:PO:0000005 | PO:PO:0000293 |
| PANTHER:PTHR13768 | PANTHER:PTHR13768:SF8 | UniProt:Q9LXZ5 | SUPFAM:SSF48452 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0000135B07 |
| SEG:seg | : | : | : | : | : |
Description
ASNAP1Alpha-soluble NSF attachment protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXZ5]
Coordinates
chr3:+:20930557..20932869
Molecular Weight (calculated)
43883.2 Da
IEP (calculated)
7.810
GRAVY (calculated)
-0.398
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MFFVKGEGFF YPLFIELRNL IRYQTTRVSN SSRDFNLSQQ HCSCFRPKRR HEAHLSFIGT LQYSKQRTIT RAASATIARR QLLLLFDITF SSSSSCYYFQ
101: KKAEKKLNRR RRFDTKYEDA ADLLEKARDS YKLAKSWDQA GIAYLKLADC HLKANSLANT YMIMDECMDH EIAEYYESDE MFEQAIAYYE TAAEFFQIEE
201: VTTSANQCNL KVAQYASQLE QQSRFMKTQA RHSLNNKLLK YGVKGHLLTA GMCHLCKADV VSITNALEKY QDLDPTFSGT RECKFLADLA SAIDEEDIAK
301: FTDVSKEIDS VSPLVWAVNH MQLFGCKLCL VLDHDNNVVE GKREVQGQGA GGGCKLYLIE GKCILDWNNV YTKRIYNYTN F
101: KKAEKKLNRR RRFDTKYEDA ADLLEKARDS YKLAKSWDQA GIAYLKLADC HLKANSLANT YMIMDECMDH EIAEYYESDE MFEQAIAYYE TAAEFFQIEE
201: VTTSANQCNL KVAQYASQLE QQSRFMKTQA RHSLNNKLLK YGVKGHLLTA GMCHLCKADV VSITNALEKY QDLDPTFSGT RECKFLADLA SAIDEEDIAK
301: FTDVSKEIDS VSPLVWAVNH MQLFGCKLCL VLDHDNNVVE GKREVQGQGA GGGCKLYLIE GKCILDWNNV YTKRIYNYTN F
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.