CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 3
endoplasmic reticulum 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007224.1-P	Field mustard	cytosol	100.0	100.0
CDX72160	Canola	cytosol	99.65	99.65
CDX67637	Canola	cytosol	97.23	97.23
AT3G56190.1	Thale cress	cytosol	96.19	96.19
CDX76057	Canola	cytosol	94.81	93.84
CDY62813	Canola	cytosol	94.46	93.49
CDY32002	Canola	cytosol	87.54	91.34
KRG97663	Soybean	endoplasmic reticulum	76.47	76.47
KRH31211	Soybean	endoplasmic reticulum, nucleus, plasma membrane	75.43	75.43
KRH14886	Soybean	endoplasmic reticulum	74.39	74.39
KRH73230	Soybean	cytosol	73.01	73.01
Solyc06g050770.2.1	Tomato	plastid	72.32	72.32
PGSC0003DMT400046100	Potato	cytosol	71.97	71.97
VIT_13s0067g02210.t01	Wine grape	extracellular	70.24	70.24
PGSC0003DMT400030420	Potato	cytosol	69.55	69.55
GSMUA_Achr11P...	Banana	cytosol	67.13	67.13
GSMUA_Achr10P...	Banana	cytosol	66.44	66.44
Solyc05g052310.2.1	Tomato	plastid	55.36	65.84
GSMUA_Achr5P00900_001	Banana	cytosol	65.4	65.4
Os08t0282400-01	Rice	plasma membrane	62.98	62.98
TraesCS7A01G292400.1	Wheat	golgi	60.9	60.9
Zm00001d033092_P001	Maize	cytosol	58.48	58.48
TraesCS7D01G284600.1	Wheat	cytosol	60.9	58.47
TraesCS7B01G182700.2	Wheat	cytosol	60.9	58.47
EER96420	Sorghum	cytosol	12.8	56.92
Zm00001d049982_P005	Maize	cytosol	62.28	51.72
PGSC0003DMT400074763	Potato	cytosol	9.69	50.91
PGSC0003DMT400089090	Potato	cytosol	52.94	49.84
PGSC0003DMT400043844	Potato	cytosol	35.64	49.52
TraesCS7B01G340300.1	Wheat	cytosol	49.48	48.81
AT3G56450.1	Thale cress	cytosol	59.17	44.88

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	GO:A0A078GPW1	UniProt:A0A078GPW1	EnsemblPlants:CDY27237	ProteinID:CDY27237
ProteinID:CDY27237.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	EnsemblPlantsGene:GSBRNA2T00037111001
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:NSF_attach	PFAM:PF14938	PRINTS:PR00448
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR13768	PANTHER:PTHR13768:SF8	SMART:SM00028	SUPFAM:SSF48452
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0002542B21	SEG:seg	:

Description

BnaA09g35650DBnaA09g35650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPW1]

Coordinates

chrLK032201:+:294190..296649

Molecular Weight (calculated)

32697.5 Da

IEP (calculated)

4.985

GRAVY (calculated)

-0.517

Length

289 amino acids

Sequence
(BLAST)

001: MGDHLVRAEE FEKKAEKKLN GWGIFGSKHE DAADLLEKAA NSYKLAKSWD LAGKAYLKVA DCHLKSDSKH DAANAYAEAA KCYKKVDTNE AASCLERAVN
101: IFCEIGRLNM AARYYKEIAE YYEADQKIEQ AIDYFEKAAE FFQNEEVTTS ANQCNLKVAQ YASQLEQYEK AIKIYEEIAR HSLGNNLLKY GVKGHLLNAG
201: MCHLCKADVV SITNALEKYQ DLDPTFTGTR ECKFLSDLAS AIDEEDIAKF TDVVKEFDSM TPLDSWKTTM LLRVKEKLKA KELEEDDLT

Best Arabidopsis Sequence Match ( AT3G56190.1 )
(BLAST)

001: MGDHLVRAEE FEKKAEKKLN GWGIFGSKYE DAADLLEKAA NSYKLAKSWD QAGKAYLKLA DCHLKSDSKH DAANAYAEAA KCYKKVDTNE AASCLERAVN
101: IFCEIGRLNM AARYYKEIAE YYESDQKFEQ AIAYFEKAAE FFQNEEVTTS ANQCNLKVAQ YAAQLEQYEK AIKIYEDIAR HSLNNNLLKY GVKGHLLTAG
201: MCHLCKADVV SITNALEKYQ DLDPTFTGTR ECKFLADLAS AIDEEDIAKF TDVVKEFDSM TPLDSWKTTM LLRVKEKLKA KELEEDDLT

Arabidopsis Description

ASNAP2At3g56190 [Source:UniProtKB/TrEMBL;Acc:Q29Q46]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.