CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003231.1-P	Field mustard	cytosol	92.78	88.93
CDX67637	Canola	cytosol	92.78	88.93
CDY27237	Canola	cytosol	91.34	87.54
CDX72160	Canola	cytosol	90.97	87.2
AT3G56190.1	Thale cress	cytosol	90.61	86.85
CDX76057	Canola	cytosol	89.53	84.93
CDY62813	Canola	cytosol	88.45	83.9
KRG97663	Soybean	endoplasmic reticulum	72.56	69.55
KRH31211	Soybean	endoplasmic reticulum, nucleus, plasma membrane	71.84	68.86
KRH14886	Soybean	endoplasmic reticulum	71.84	68.86
KRH73230	Soybean	cytosol	70.4	67.47
Solyc06g050770.2.1	Tomato	plastid	69.31	66.44
PGSC0003DMT400046100	Potato	cytosol	68.95	66.09
VIT_13s0067g02210.t01	Wine grape	extracellular	67.15	64.36
PGSC0003DMT400030420	Potato	cytosol	66.79	64.01
GSMUA_Achr11P...	Banana	cytosol	63.9	61.25
GSMUA_Achr10P...	Banana	cytosol	63.18	60.55
GSMUA_Achr5P00900_001	Banana	cytosol	62.09	59.52
Solyc05g052310.2.1	Tomato	plastid	51.26	58.44
Os08t0282400-01	Rice	plasma membrane	60.29	57.79
TraesCS7A01G292400.1	Wheat	golgi	58.48	56.06
Zm00001d033092_P001	Maize	cytosol	56.68	54.33
TraesCS7B01G182700.2	Wheat	cytosol	58.48	53.82
TraesCS7D01G284600.1	Wheat	cytosol	58.48	53.82
EER96420	Sorghum	cytosol	11.91	50.77
PGSC0003DMT400043844	Potato	cytosol	37.18	49.52
PGSC0003DMT400074763	Potato	cytosol	9.75	49.09
Zm00001d049982_P005	Maize	cytosol	59.93	47.7
PGSC0003DMT400089090	Potato	cytosol	52.35	47.23
TraesCS7B01G340300.1	Wheat	cytosol	47.29	44.71
AT3G56450.1	Thale cress	cytosol	55.23	40.16

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	GO:A0A078H3E5	UniProt:A0A078H3E5	EnsemblPlants:CDY32002	ProteinID:CDY32002
ProteinID:CDY32002.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	EnsemblPlantsGene:GSBRNA2T00050818001
InterPro:IPR011990	InterPro:NSF_attach	PFAM:PF14938	PRINTS:PR00448	PANTHER:PTHR13768	PANTHER:PTHR13768:SF8
SUPFAM:SSF48452	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0004EEA889	SEG:seg	:	:

Description

BnaC06g15800DBnaC06g15800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3E5]

Coordinates

chrLK032284:-:38835..40997

Molecular Weight (calculated)

31450.4 Da

IEP (calculated)

6.776

GRAVY (calculated)

-0.512

Length

277 amino acids

Sequence
(BLAST)

001: MGDHLGREEE FEKKLNGRGI FGSKYEDAAD LLEKAANSYK LAKSWDQAGK AYLKLADCHL KSDSKHDAAN AYAEAAKYYK KVDTNEAASC LERAVNIFCE
101: IGRLNMAARY YKEIAEYYEA RRSIRLLFTM KRQLITTSAN QCNLKVAQYA SQLEQYEKAI KIYEDIARHS LGNNLLKYGV KGHLLNAGMC HLCKADVVSI
201: TNALEKYQDL DPTFTGTREC KFLSDLAAAI DEEDIAKFTN VVKEFDSMTP LDSWKTTMLL RVKEKLKAKE LEEDDLT

Best Arabidopsis Sequence Match ( AT3G56190.1 )
(BLAST)

001: MGDHLVRAEE FEKKAEKKLN GWGIFGSKYE DAADLLEKAA NSYKLAKSWD QAGKAYLKLA DCHLKSDSKH DAANAYAEAA KCYKKVDTNE AASCLERAVN
101: IFCEIGRLNM AARYYKEIAE YYESDQKFEQ AIAYFEKAAE FFQNEEVTTS ANQCNLKVAQ YAAQLEQYEK AIKIYEDIAR HSLNNNLLKY GVKGHLLTAG
201: MCHLCKADVV SITNALEKYQ DLDPTFTGTR ECKFLADLAS AIDEEDIAKF TDVVKEFDSM TPLDSWKTTM LLRVKEKLKA KELEEDDLT

Arabidopsis Description

ASNAP2At3g56190 [Source:UniProtKB/TrEMBL;Acc:Q29Q46]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.