CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007224.1-P	Field mustard	cytosol	99.65	99.65
CDY27237	Canola	cytosol	99.65	99.65
CDX67637	Canola	cytosol	96.89	96.89
AT3G56190.1	Thale cress	cytosol	95.85	95.85
CDX76057	Canola	cytosol	94.46	93.49
CDY62813	Canola	cytosol	94.12	93.15
CDY32002	Canola	cytosol	87.2	90.97
KRG97663	Soybean	endoplasmic reticulum	76.47	76.47
KRH31211	Soybean	endoplasmic reticulum, nucleus, plasma membrane	75.43	75.43
KRH14886	Soybean	endoplasmic reticulum	74.39	74.39
KRH73230	Soybean	cytosol	73.01	73.01
Solyc06g050770.2.1	Tomato	plastid	72.32	72.32
PGSC0003DMT400046100	Potato	cytosol	71.97	71.97
VIT_13s0067g02210.t01	Wine grape	extracellular	70.24	70.24
PGSC0003DMT400030420	Potato	cytosol	69.55	69.55
GSMUA_Achr11P...	Banana	cytosol	67.13	67.13
GSMUA_Achr10P...	Banana	cytosol	66.44	66.44
Solyc05g052310.2.1	Tomato	plastid	55.36	65.84
GSMUA_Achr5P00900_001	Banana	cytosol	65.4	65.4
Os08t0282400-01	Rice	plasma membrane	62.98	62.98
TraesCS7A01G292400.1	Wheat	golgi	60.9	60.9
Zm00001d033092_P001	Maize	cytosol	58.48	58.48
TraesCS7D01G284600.1	Wheat	cytosol	60.9	58.47
TraesCS7B01G182700.2	Wheat	cytosol	60.9	58.47
EER96420	Sorghum	cytosol	12.8	56.92
Zm00001d049982_P005	Maize	cytosol	62.28	51.72
PGSC0003DMT400074763	Potato	cytosol	9.69	50.91
PGSC0003DMT400089090	Potato	cytosol	52.94	49.84
PGSC0003DMT400043844	Potato	cytosol	35.64	49.52
TraesCS7B01G340300.1	Wheat	cytosol	49.48	48.81
AT3G56450.1	Thale cress	cytosol	58.82	44.62

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	GO:A0A078C5Q9	EnsemblPlants:CDX72160	ProteinID:CDX72160	ProteinID:CDX72160.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006810	GO:GO:0006886
GO:GO:0008150	EnsemblPlantsGene:GSBRNA2T00155985001	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:NSF_attach
PFAM:PF14938	PRINTS:PR00448	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR13768	PANTHER:PTHR13768:SF8
SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0004EDE678
SEG:seg	:	:	:	:	:

Description

BnaC08g27140D

Coordinates

chrLK031795:+:2756467..2758928

Molecular Weight (calculated)

32679.5 Da

IEP (calculated)

4.985

GRAVY (calculated)

-0.511

Length

289 amino acids

Sequence
(BLAST)

001: MGDHLVRAEE FEKKAEKKLN GWGIFGSKHE DAADLLEKAA NSYKLAKSWD LAGKAYLKVA DCHLKSDSKH DAANAYAEAA KCYKKVDTNE AASCLERAVN
101: IFCEIGRLNM AARYYKEIAE YYEADQKIEQ AIDYFEKAAE FFQNEEVTTS ANQCNLKVAQ YASQLEQYEK AIKIYEEIAR HSLGNNLLKY GVKGHLLNAG
201: LCHLCKADVV SITNALEKYQ DLDPTFTGTR ECKFLSDLAS AIDEEDIAKF TDVVKEFDSM TPLDSWKTTM LLRVKEKLKA KELEEDDLT

Best Arabidopsis Sequence Match ( AT3G56190.1 )
(BLAST)

001: MGDHLVRAEE FEKKAEKKLN GWGIFGSKYE DAADLLEKAA NSYKLAKSWD QAGKAYLKLA DCHLKSDSKH DAANAYAEAA KCYKKVDTNE AASCLERAVN
101: IFCEIGRLNM AARYYKEIAE YYESDQKFEQ AIAYFEKAAE FFQNEEVTTS ANQCNLKVAQ YAAQLEQYEK AIKIYEDIAR HSLNNNLLKY GVKGHLLTAG
201: MCHLCKADVV SITNALEKYQ DLDPTFTGTR ECKFLADLAS AIDEEDIAKF TDVVKEFDSM TPLDSWKTTM LLRVKEKLKA KELEEDDLT

Arabidopsis Description

ASNAP2At3g56190 [Source:UniProtKB/TrEMBL;Acc:Q29Q46]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.