Factsheet for PGSC0003DMT400046100

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 2
endoplasmic reticulum 1
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g050770.2.1	Tomato	plastid	98.62	98.62
PGSC0003DMT400030420	Potato	cytosol	87.89	87.89
KRG97663	Soybean	endoplasmic reticulum	79.24	79.24
KRH31211	Soybean	endoplasmic reticulum, nucleus, plasma membrane	78.89	78.89
VIT_13s0067g02210.t01	Wine grape	extracellular	77.85	77.85
KRH14886	Soybean	endoplasmic reticulum	76.47	76.47
KRH73230	Soybean	cytosol	74.74	74.74
GSMUA_Achr10P...	Banana	cytosol	73.7	73.7
GSMUA_Achr11P...	Banana	cytosol	73.7	73.7
Bra003231.1-P	Field mustard	cytosol	73.01	73.01
CDX67637	Canola	cytosol	73.01	73.01
GSMUA_Achr5P00900_001	Banana	cytosol	73.01	73.01
CDX76057	Canola	cytosol	73.7	72.95
AT3G56190.1	Thale cress	cytosol	72.66	72.66
Bra014705.1-P	Field mustard	cytosol	73.36	72.6
CDY27237	Canola	cytosol	71.97	71.97
CDX72160	Canola	cytosol	71.97	71.97
Bra007224.1-P	Field mustard	cytosol	71.97	71.97
CDY62813	Canola	cytosol	71.63	70.89
CDY32002	Canola	cytosol	66.09	68.95
Os08t0282400-01	Rice	plasma membrane	68.17	68.17
TraesCS7A01G292400.1	Wheat	golgi	68.17	68.17
PGSC0003DMT400074763	Potato	cytosol	12.8	67.27
TraesCS7D01G284600.1	Wheat	cytosol	68.17	65.45
TraesCS7B01G182700.2	Wheat	cytosol	67.47	64.78
Zm00001d033092_P001	Maize	cytosol	64.71	64.71
PGSC0003DMT400089090	Potato	cytosol	63.32	59.61
Zm00001d049982_P005	Maize	cytosol	69.55	57.76
TraesCS7B01G340300.1	Wheat	cytosol	57.44	56.66
PGSC0003DMT400043844	Potato	cytosol	40.14	55.77
AT3G56450.1	Thale cress	cytosol	48.79	37.01

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:102602621	MapMan:35.1	ProteinID:AAF37280	ProteinID:AAF37280.1	EMBL:AF225512
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	UniProt:M1BIN2	InterPro:NSF_attach	PFAM:PF14938
EnsemblPlantsGene:PGSC0003DMG400017893	PGSC:PGSC0003DMG400017893	EnsemblPlants:PGSC0003DMT400046100	PRINTS:PR00448	PFscan:PS50005	PFscan:PS50293
PANTHER:PTHR13768	PANTHER:PTHR13768:SF8	SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_repeat	UniParc:UPI00029642C8	RefSeq:XP_006353403.1	SEG:seg	:	:

Description

Alpha-soluble NSF attachment protein [Source:PGSC_GENE;Acc:PGSC0003DMG400017893]

Coordinates

chr6:-:30817826..30825786

Molecular Weight (calculated)

32611.4 Da

IEP (calculated)

4.867

GRAVY (calculated)

-0.456

Length

289 amino acids

Sequence
(BLAST)

001: MGDHIARGED FENKAEKKLG GWALFGSKYE DAADLFDKAG NCFKLAKSWD KAGAVYVKLA NCHLKLDSKH EAANAYADAA HCYKKSNIKE AVSCLEQAVN
101: FFLDIGRLNM SARYYKEIAE LYEQEQNLDQ AINYYEKAAD LFQSEDVTTT ANQCKQKVAQ FSAQIEKYPR AIEIFEEIAR HSVNNNLLKY GVRGHLLNAG
201: ICQLCKGDVV AINNALERYQ ELDPTFSGTR ECKLLVDLAA AIDEEDVAKF TDAVKEYDSM TQLDAWRTTL LLRVKETLKA KELEEDDLT

Best Arabidopsis Sequence Match ( AT3G56190.1 )
(BLAST)

001: MGDHLVRAEE FEKKAEKKLN GWGIFGSKYE DAADLLEKAA NSYKLAKSWD QAGKAYLKLA DCHLKSDSKH DAANAYAEAA KCYKKVDTNE AASCLERAVN
101: IFCEIGRLNM AARYYKEIAE YYESDQKFEQ AIAYFEKAAE FFQNEEVTTS ANQCNLKVAQ YAAQLEQYEK AIKIYEDIAR HSLNNNLLKY GVKGHLLTAG
201: MCHLCKADVV SITNALEKYQ DLDPTFTGTR ECKFLADLAS AIDEEDIAKF TDVVKEFDSM TPLDSWKTTM LLRVKEKLKA KELEEDDLT

Arabidopsis Description

ASNAP2At3g56190 [Source:UniProtKB/TrEMBL;Acc:Q29Q46]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.