Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003231.1-P | Field mustard | cytosol | 96.89 | 96.89 |
| CDX67637 | Canola | cytosol | 96.89 | 96.89 |
| Bra007224.1-P | Field mustard | cytosol | 96.19 | 96.19 |
| CDY27237 | Canola | cytosol | 96.19 | 96.19 |
| CDX72160 | Canola | cytosol | 95.85 | 95.85 |
| CDX76057 | Canola | cytosol | 95.16 | 94.18 |
| Bra014705.1-P | Field mustard | cytosol | 94.81 | 93.84 |
| CDY62813 | Canola | cytosol | 94.46 | 93.49 |
| CDY32002 | Canola | cytosol | 86.85 | 90.61 |
| KRG97663 | Soybean | endoplasmic reticulum | 77.16 | 77.16 |
| KRH31211 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 76.12 | 76.12 |
| KRH14886 | Soybean | endoplasmic reticulum | 75.43 | 75.43 |
| KRH73230 | Soybean | cytosol | 74.39 | 74.39 |
| Solyc06g050770.2.1 | Tomato | plastid | 73.01 | 73.01 |
| PGSC0003DMT400046100 | Potato | cytosol | 72.66 | 72.66 |
| VIT_13s0067g02210.t01 | Wine grape | extracellular | 71.97 | 71.97 |
| PGSC0003DMT400030420 | Potato | cytosol | 69.9 | 69.9 |
| GSMUA_Achr11P... | Banana | cytosol | 68.17 | 68.17 |
| GSMUA_Achr10P... | Banana | cytosol | 67.47 | 67.47 |
| GSMUA_Achr5P00900_001 | Banana | cytosol | 66.44 | 66.44 |
| Solyc05g052310.2.1 | Tomato | plastid | 55.71 | 66.26 |
| Os08t0282400-01 | Rice | plasma membrane | 62.98 | 62.98 |
| TraesCS7A01G292400.1 | Wheat | golgi | 61.25 | 61.25 |
| Zm00001d033092_P001 | Maize | cytosol | 59.17 | 59.17 |
| TraesCS7D01G284600.1 | Wheat | cytosol | 61.25 | 58.8 |
| TraesCS7B01G182700.2 | Wheat | cytosol | 61.25 | 58.8 |
| EER96420 | Sorghum | cytosol | 13.15 | 58.46 |
| PGSC0003DMT400074763 | Potato | cytosol | 10.03 | 52.73 |
| Zm00001d049982_P005 | Maize | cytosol | 62.98 | 52.3 |
| PGSC0003DMT400043844 | Potato | cytosol | 36.33 | 50.48 |
| PGSC0003DMT400089090 | Potato | cytosol | 53.29 | 50.16 |
| TraesCS7B01G340300.1 | Wheat | cytosol | 49.48 | 48.81 |
| AT3G56450.1 | Thale cress | cytosol | 61.94 | 46.98 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:824785 | UniProt:A0A178VG00 | ProteinID:AEE79491.1 | EMBL:AF177989 |
| EMBL:AK118366 | Symbol:ALPHA-SNAP2 | ArrayExpress:AT3G56190 | EnsemblPlantsGene:AT3G56190 | RefSeq:AT3G56190 | TAIR:AT3G56190 |
| RefSeq:AT3G56190-TAIR-G | EnsemblPlants:AT3G56190.1 | TAIR:AT3G56190.1 | Unigene:At.5064 | EMBL:BT024710 | ProteinID:CAB87418.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005483 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0015031 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016192 | GO:GO:0019905 | GO:GO:0031201 | GO:GO:0035494 |
| GO:GO:0061025 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | RefSeq:NP_191178.1 | InterPro:NSF_attach |
| ProteinID:OAP04451.1 | PFAM:PF14938 | PO:PO:0000005 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0009025 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00448 | PFscan:PS50005 | PFscan:PS50293 |
| PANTHER:PTHR13768 | PANTHER:PTHR13768:SF8 | UniProt:Q29Q46 | UniProt:Q9SPE6 | SMART:SM00028 | SUPFAM:SSF48452 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0000135B0A | SEG:seg | : |
Description
ASNAP2At3g56190 [Source:UniProtKB/TrEMBL;Acc:Q29Q46]
Coordinates
chr3:-:20845674..20848695
Molecular Weight (calculated)
32756.6 Da
IEP (calculated)
4.977
GRAVY (calculated)
-0.517
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDHLVRAEE FEKKAEKKLN GWGIFGSKYE DAADLLEKAA NSYKLAKSWD QAGKAYLKLA DCHLKSDSKH DAANAYAEAA KCYKKVDTNE AASCLERAVN
101: IFCEIGRLNM AARYYKEIAE YYESDQKFEQ AIAYFEKAAE FFQNEEVTTS ANQCNLKVAQ YAAQLEQYEK AIKIYEDIAR HSLNNNLLKY GVKGHLLTAG
201: MCHLCKADVV SITNALEKYQ DLDPTFTGTR ECKFLADLAS AIDEEDIAKF TDVVKEFDSM TPLDSWKTTM LLRVKEKLKA KELEEDDLT
101: IFCEIGRLNM AARYYKEIAE YYESDQKFEQ AIAYFEKAAE FFQNEEVTTS ANQCNLKVAQ YAAQLEQYEK AIKIYEDIAR HSLNNNLLKY GVKGHLLTAG
201: MCHLCKADVV SITNALEKYQ DLDPTFTGTR ECKFLADLAS AIDEEDIAKF TDVVKEFDSM TPLDSWKTTM LLRVKEKLKA KELEEDDLT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.