CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014705.1-P	Field mustard	cytosol	99.32	99.32
CDX67637	Canola	cytosol	94.52	95.5
AT3G56190.1	Thale cress	cytosol	94.18	95.16
CDY27237	Canola	cytosol	93.84	94.81
CDY62813	Canola	cytosol	94.52	94.52
CDX72160	Canola	cytosol	93.49	94.46
CDY32002	Canola	cytosol	84.93	89.53
KRG97663	Soybean	endoplasmic reticulum	77.4	78.2
KRH31211	Soybean	endoplasmic reticulum, nucleus, plasma membrane	76.37	77.16
KRH14886	Soybean	endoplasmic reticulum	73.63	74.39
PGSC0003DMT400046100	Potato	cytosol	72.95	73.7
Solyc06g050770.2.1	Tomato	plastid	72.95	73.7
KRH73230	Soybean	cytosol	72.6	73.36
VIT_13s0067g02210.t01	Wine grape	extracellular	71.58	72.32
PGSC0003DMT400030420	Potato	cytosol	70.21	70.93
GSMUA_Achr11P...	Banana	cytosol	67.12	67.82
GSMUA_Achr10P...	Banana	cytosol	66.44	67.13
Solyc05g052310.2.1	Tomato	plastid	55.82	67.08
GSMUA_Achr5P00900_001	Banana	cytosol	65.41	66.09
Os08t0282400-01	Rice	plasma membrane	64.04	64.71
TraesCS7A01G292400.1	Wheat	golgi	61.99	62.63
EER96420	Sorghum	cytosol	13.7	61.54
TraesCS7D01G284600.1	Wheat	cytosol	61.99	60.13
TraesCS7B01G182700.2	Wheat	cytosol	61.99	60.13
Zm00001d033092_P001	Maize	cytosol	59.25	59.86
PGSC0003DMT400074763	Potato	cytosol	10.27	54.55
Zm00001d049982_P005	Maize	cytosol	63.36	53.16
TraesCS7B01G340300.1	Wheat	cytosol	50.68	50.51
PGSC0003DMT400089090	Potato	cytosol	53.08	50.49
PGSC0003DMT400043844	Potato	cytosol	35.96	50.48
AT3G56450.1	Thale cress	cytosol	57.19	43.83

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	GO:A0A078CH50	EnsemblPlants:CDX76057	ProteinID:CDX76057	ProteinID:CDX76057.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006810	GO:GO:0006886
GO:GO:0008150	EnsemblPlantsGene:GSBRNA2T00126293001	InterPro:IPR011990	InterPro:IPR019734	InterPro:NSF_attach	PFAM:PF14938
PRINTS:PR00448	PFscan:PS50005	PANTHER:PTHR13768	PANTHER:PTHR13768:SF8	SMART:SM00028	SUPFAM:SSF48452
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0004EE378A	SEG:seg	:	:

Description

BnaA04g03210D

Coordinates

chrLK031806:+:454297..456192

Molecular Weight (calculated)

33060.9 Da

IEP (calculated)

5.067

GRAVY (calculated)

-0.543

Length

292 amino acids

Sequence
(BLAST)

001: MGDHHHHQVR AEEFEKKAEK KLSGWGIFGS KYEDAADLLE KAANSFKLAK SWDQAGKAYL KLADCHLKSD SKHDAANAYA EAAKCYKKVD TNEAASCLER
101: AVNIFCEIGR LNMAARYYKE IAEYYEGDQK IDQAISYFEK AAEFFQNEEV TTSANQCNLK VAQYAAQLEQ YEKAIKIYEE IACQSLNNNL LKYGVKGHLL
201: NAGMCHLCKA DVVSITNALE KYQDLDPTFT GTRECKFLSD LAAAMDEEDI AKFTDVVKEF DSMTPLDSWK TTMLLRVKEK LKAKELEEDD LT

Best Arabidopsis Sequence Match ( AT3G56190.1 )
(BLAST)

001: MGDHLVRAEE FEKKAEKKLN GWGIFGSKYE DAADLLEKAA NSYKLAKSWD QAGKAYLKLA DCHLKSDSKH DAANAYAEAA KCYKKVDTNE AASCLERAVN
101: IFCEIGRLNM AARYYKEIAE YYESDQKFEQ AIAYFEKAAE FFQNEEVTTS ANQCNLKVAQ YAAQLEQYEK AIKIYEDIAR HSLNNNLLKY GVKGHLLTAG
201: MCHLCKADVV SITNALEKYQ DLDPTFTGTR ECKFLADLAS AIDEEDIAKF TDVVKEFDSM TPLDSWKTTM LLRVKEKLKA KELEEDDLT

Arabidopsis Description

ASNAP2At3g56190 [Source:UniProtKB/TrEMBL;Acc:Q29Q46]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.