CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 2
endoplasmic reticulum 1
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003231.1-P	Field mustard	cytosol	100.0	100.0
CDY27237	Canola	cytosol	97.23	97.23
AT3G56190.1	Thale cress	cytosol	96.89	96.89
CDX72160	Canola	cytosol	96.89	96.89
CDX76057	Canola	cytosol	95.5	94.52
CDY62813	Canola	cytosol	94.81	93.84
CDY32002	Canola	cytosol	88.93	92.78
KRG97663	Soybean	endoplasmic reticulum	76.82	76.82
KRH31211	Soybean	endoplasmic reticulum, nucleus, plasma membrane	75.78	75.78
KRH14886	Soybean	endoplasmic reticulum	75.09	75.09
KRH73230	Soybean	cytosol	74.39	74.39
Solyc06g050770.2.1	Tomato	plastid	73.36	73.36
PGSC0003DMT400046100	Potato	cytosol	73.01	73.01
VIT_13s0067g02210.t01	Wine grape	extracellular	70.59	70.59
PGSC0003DMT400030420	Potato	cytosol	70.24	70.24
GSMUA_Achr11P...	Banana	cytosol	66.78	66.78
Solyc05g052310.2.1	Tomato	plastid	56.06	66.67
GSMUA_Achr10P...	Banana	cytosol	66.09	66.09
GSMUA_Achr5P00900_001	Banana	cytosol	65.05	65.05
Os08t0282400-01	Rice	plasma membrane	62.63	62.63
TraesCS7A01G292400.1	Wheat	golgi	60.21	60.21
EER96420	Sorghum	cytosol	13.15	58.46
Zm00001d033092_P001	Maize	cytosol	58.13	58.13
TraesCS7B01G182700.2	Wheat	cytosol	60.21	57.81
TraesCS7D01G284600.1	Wheat	cytosol	60.21	57.81
PGSC0003DMT400074763	Potato	cytosol	10.03	52.73
Zm00001d049982_P005	Maize	cytosol	61.94	51.44
PGSC0003DMT400043844	Potato	cytosol	36.33	50.48
PGSC0003DMT400089090	Potato	cytosol	53.29	50.16
TraesCS7B01G340300.1	Wheat	cytosol	49.13	48.46
AT3G56450.1	Thale cress	cytosol	60.21	45.67

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	GO:A0A078BTW2	EnsemblPlants:CDX67637	ProteinID:CDX67637	ProteinID:CDX67637.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006810	GO:GO:0006886
GO:GO:0008150	EnsemblPlantsGene:GSBRNA2T00098796001	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:NSF_attach
PFAM:PF14938	PRINTS:PR00448	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR13768	PANTHER:PTHR13768:SF8
SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI00025414C4
SEG:seg	:	:	:	:	:

Description

BnaA07g16770D

Coordinates

chrLK031787:-:1441445..1443668

Molecular Weight (calculated)

32666.5 Da

IEP (calculated)

4.973

GRAVY (calculated)

-0.532

Length

289 amino acids

Sequence
(BLAST)

001: MGDHLVRAEE FEKKAEKKLN GWGIFGSKYE DAADLLEKAA NSYKLAKSWD QAGKAYLKLA DCHLKSDSKH DAANAYAEAA KCYKKVDTNE AASCLERAVN
101: IFCEIGRLNM AARYYKEIAE YYEADQKIDQ AIAYYEKAAE FFQNEEVTTS ANQCNLKVAQ YASQLEQYEK AIKIYEDIAR HSLGNNLLKY GVKGHLLNAG
201: MCHLCKADVV SITNALEKYQ DLDPTFTGTR ECKFLSDLAG AIDEEDIAKF TDVVKEFDSM TPLDSWKTTM LLRVKEKLKA KELEEDDLT

Best Arabidopsis Sequence Match ( AT3G56190.1 )
(BLAST)

001: MGDHLVRAEE FEKKAEKKLN GWGIFGSKYE DAADLLEKAA NSYKLAKSWD QAGKAYLKLA DCHLKSDSKH DAANAYAEAA KCYKKVDTNE AASCLERAVN
101: IFCEIGRLNM AARYYKEIAE YYESDQKFEQ AIAYFEKAAE FFQNEEVTTS ANQCNLKVAQ YAAQLEQYEK AIKIYEDIAR HSLNNNLLKY GVKGHLLTAG
201: MCHLCKADVV SITNALEKYQ DLDPTFTGTR ECKFLADLAS AIDEEDIAKF TDVVKEFDSM TPLDSWKTTM LLRVKEKLKA KELEEDDLT

Arabidopsis Description

ASNAP2At3g56190 [Source:UniProtKB/TrEMBL;Acc:Q29Q46]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.