Factsheet for PGSC0003DMT400043844

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 3
endoplasmic reticulum 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400089090	Potato	cytosol	71.15	48.21
PGSC0003DMT400074763	Potato	cytosol	12.5	47.27
PGSC0003DMT400030420	Potato	cytosol	61.06	43.94
PGSC0003DMT400046100	Potato	cytosol	55.77	40.14
Solyc05g052310.2.1	Tomato	plastid	43.75	37.45
KRH31211	Soybean	endoplasmic reticulum, nucleus, plasma membrane	51.92	37.37
CDY32002	Canola	cytosol	49.52	37.18
KRG97663	Soybean	endoplasmic reticulum	51.44	37.02
AT3G56190.1	Thale cress	cytosol	50.48	36.33
VIT_13s0067g02210.t01	Wine grape	extracellular	50.48	36.33
CDX67637	Canola	cytosol	50.48	36.33
Bra003231.1-P	Field mustard	cytosol	50.48	36.33
CDX76057	Canola	cytosol	50.48	35.96
CDY27237	Canola	cytosol	49.52	35.64
CDX72160	Canola	cytosol	49.52	35.64
Bra007224.1-P	Field mustard	cytosol	49.52	35.64
Bra014705.1-P	Field mustard	cytosol	50.0	35.62
CDY62813	Canola	cytosol	49.52	35.27
GSMUA_Achr10P...	Banana	cytosol	48.08	34.6
GSMUA_Achr11P...	Banana	cytosol	46.15	33.22
KRH14886	Soybean	endoplasmic reticulum	45.67	32.87
KRH73230	Soybean	cytosol	45.19	32.53
GSMUA_Achr5P00900_001	Banana	cytosol	45.19	32.53
Os08t0282400-01	Rice	plasma membrane	44.23	31.83
TraesCS7A01G292400.1	Wheat	golgi	42.79	30.8
Zm00001d033092_P001	Maize	cytosol	41.35	29.76
TraesCS7D01G284600.1	Wheat	cytosol	42.79	29.57
TraesCS7B01G182700.2	Wheat	cytosol	41.83	28.9
TraesCS7B01G340300.1	Wheat	cytosol	39.42	27.99
Zm00001d049982_P005	Maize	cytosol	44.23	26.44
AT3G56450.1	Thale cress	cytosol	33.65	18.37

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	InterPro:IPR011990
UniProt:M1BF97	InterPro:NSF_attach	PFAM:PF14938	EnsemblPlantsGene:PGSC0003DMG400017017	PGSC:PGSC0003DMG400017017	EnsemblPlants:PGSC0003DMT400043844
PANTHER:PTHR13768	PANTHER:PTHR13768:SF8	SUPFAM:SSF48452	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000295D2F5	SEG:seg

Description

Alpha-soluble NSF attachment protein [Source:PGSC_GENE;Acc:PGSC0003DMG400017017]

Coordinates

chr5:-:23309697..23311691

Molecular Weight (calculated)

23966.5 Da

IEP (calculated)

9.535

GRAVY (calculated)

-0.133

Length

208 amino acids

Sequence
(BLAST)

001: MGDQISRGEE LVKKAEKKLN GWGFFGSKYY DAAYLLHKAV DCFELTKSWD RVGAVYVKLA SCHLKLDHKH EAARAYDITA DYYKMTKNLK EAISCLEKAT
101: HLFLDIKRLN ATRGYYQILH TTFLGTRECK FPMGLAAAID KRDVAEFTSC LKEYDSIIKL DEWRTLVLLK VKEALKVKAL ESKGQLGRLF YIVPCSLILF
201: CMKKIRLF

Best Arabidopsis Sequence Match ( AT3G56190.1 )
(BLAST)

001: MGDHLVRAEE FEKKAEKKLN GWGIFGSKYE DAADLLEKAA NSYKLAKSWD QAGKAYLKLA DCHLKSDSKH DAANAYAEAA KCYKKVDTNE AASCLERAVN
101: IFCEIGRLNM AARYYKEIAE YYESDQKFEQ AIAYFEKAAE FFQNEEVTTS ANQCNLKVAQ YAAQLEQYEK AIKIYEDIAR HSLNNNLLKY GVKGHLLTAG
201: MCHLCKADVV SITNALEKYQ DLDPTFTGTR ECKFLADLAS AIDEEDIAKF TDVVKEFDSM TPLDSWKTTM LLRVKEKLKA KELEEDDLT

Arabidopsis Description

ASNAP2At3g56190 [Source:UniProtKB/TrEMBL;Acc:Q29Q46]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.