Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_12s0059g02360.t01 | Wine grape | nucleus | 52.33 | 61.64 |
| VIT_10s0116g00500.t01 | Wine grape | nucleus | 48.84 | 56.0 |
| VIT_16s0050g02530.t01 | Wine grape | nucleus | 36.05 | 35.23 |
| VIT_15s0046g01130.t01 | Wine grape | nucleus | 33.72 | 32.95 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100252176 | MapMan:15.5.2.2 | ProteinID:CBI23242 | ProteinID:CBI23242.3 | UniProt:E0CVT1 |
| EMBL:FN595248 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | PFAM:PF00249 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF724 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0001BE2225 | ArrayExpress:VIT_10s0116g01760 |
| EnsemblPlantsGene:VIT_10s0116g01760 | EnsemblPlants:VIT_10s0116g01760.t01 | RefSeq:XP_010655396.1 | : | : | : |
Description
No Description!
Coordinates
chr10:+:1034267..1034786
Molecular Weight (calculated)
9738.2 Da
IEP (calculated)
4.715
GRAVY (calculated)
-0.970
Length
86 amino acids
Sequence
(BLAST)
(BLAST)
1: MGSFQAMEED SKTSSNVTTS EDTKEETAKD SKVEFSEDEE TLIARMFRLV GDRWNLIAGR IPGRSAEEIK KYWTSKSVSS STKQHD
1: MFRSDKAEKM DKRRRRQSKA KASCSEEVSS IEWEAVKMSE EEEDLISRMY KLVGDRWELI AGRIPGRTPE EIERYWLMKH GVVFANRRRD FFRK
Arabidopsis Description
CPCTranscription factor CPC [Source:UniProtKB/Swiss-Prot;Acc:O22059]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.