Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH25406 | Soybean | nucleus | 69.86 | 69.86 |
| KRH56099 | Soybean | endoplasmic reticulum, nucleus | 60.27 | 69.84 |
| VIT_10s0116g00500.t01 | Wine grape | nucleus | 71.23 | 69.33 |
| KRH22538 | Soybean | nucleus | 65.75 | 64.0 |
| GSMUA_Achr9P11590_001 | Banana | nucleus | 68.49 | 63.29 |
| KRH26818 | Soybean | nucleus | 61.64 | 60.0 |
| VIT_10s0116g01760.t01 | Wine grape | nucleus | 61.64 | 52.33 |
| Solyc07g052490.2.1 | Tomato | nucleus | 58.9 | 51.19 |
| VIT_16s0050g02530.t01 | Wine grape | nucleus | 45.21 | 37.5 |
| VIT_15s0046g01130.t01 | Wine grape | nucleus | 43.84 | 36.36 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100246481 | wikigene:100246481 | MapMan:15.5.2.2 | ProteinID:CBI28950 | ProteinID:CBI28950.3 |
| UniProt:D7TEM7 | EMBL:FN595765 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | EntrezGene:LOC100246481 |
| wikigene:LOC100246481 | PFAM:PF00249 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF724 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | TIGR:TC64791 | UniParc:UPI00015CB2DC | ArrayExpress:VIT_12s0059g02360 | EnsemblPlantsGene:VIT_12s0059g02360 | EnsemblPlants:VIT_12s0059g02360.t01 |
| RefSeq:XP_002280056 | RefSeq:XP_002280056.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr12:-:7147609..7148670
Molecular Weight (calculated)
8278.3 Da
IEP (calculated)
4.159
GRAVY (calculated)
-0.866
Length
73 amino acids
Sequence
(BLAST)
(BLAST)
1: MADLDHSSDG SSLDSREGSS QDSKLEFSED EETLITRMFN LVGERWSLIA GRIPGRTAEE IEKYWTSRYS SSE
1: MFRSDKAEKM DKRRRRQSKA KASCSEEVSS IEWEAVKMSE EEEDLISRMY KLVGDRWELI AGRIPGRTPE EIERYWLMKH GVVFANRRRD FFRK
Arabidopsis Description
CPCTranscription factor CPC [Source:UniProtKB/Swiss-Prot;Acc:O22059]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.