Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26818 | Soybean | nucleus | 82.67 | 82.67 |
| VIT_12s0059g02360.t01 | Wine grape | nucleus | 64.0 | 65.75 |
| KRH56099 | Soybean | endoplasmic reticulum, nucleus | 53.33 | 63.49 |
| KRH25406 | Soybean | nucleus | 61.33 | 63.01 |
| GSMUA_Achr9P11590_001 | Banana | nucleus | 62.67 | 59.49 |
| Solyc07g052490.2.1 | Tomato | nucleus | 56.0 | 50.0 |
| KRH77639 | Soybean | cytosol | 41.33 | 38.75 |
| KRH27851 | Soybean | cytosol | 40.0 | 37.5 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | EntrezGene:778180 | UniProt:A0A0R0GWD9 | EMBL:ACUP02008417 | EnsemblPlantsGene:GLYMA_13G307300 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| EnsemblPlants:KRH22538 | ProteinID:KRH22538 | ProteinID:KRH22538.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF724 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00005B0D33 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:40316212..40317730
Molecular Weight (calculated)
8391.6 Da
IEP (calculated)
4.582
GRAVY (calculated)
-0.696
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MADSDLSSSQ ISTHSTDSGN RGSSKVEFSE DEETLIIRMY KLVGERWSII AGRIPGRTAE EIEKYWTSRF SGSSE
1: MNTQRKSKHL KTNPTIVASS SEEVSSLEWE EIAMAQEEED LICRMYKLVG ERWDLIAGRI PGRTAEEIER FWVMKNHRRS QLR
Arabidopsis Description
ETC1MYB-like transcription factor ETC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNI5]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.