Subcellular Localization
min:
: max
Winner_takes_all: nucleus, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 3
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 4
- vacuole 3
- nucleus 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH25406 | Soybean | nucleus | 88.89 | 76.71 |
| VIT_12s0059g02360.t01 | Wine grape | nucleus | 69.84 | 60.27 |
| KRH26818 | Soybean | nucleus | 65.08 | 54.67 |
| KRH22538 | Soybean | nucleus | 63.49 | 53.33 |
| GSMUA_Achr9P11590_001 | Banana | nucleus | 61.9 | 49.37 |
| Solyc07g052490.2.1 | Tomato | nucleus | 55.56 | 41.67 |
| KRH77639 | Soybean | cytosol | 47.62 | 37.5 |
| KRH27851 | Soybean | cytosol | 46.03 | 36.25 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.2 | EMBL:ACUP02004100 | EnsemblPlantsGene:GLYMA_06G303100 | GO:GO:0000981 | GO:GO:0001135 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7KY99 | EnsemblPlants:KRH56099 | ProteinID:KRH56099 | ProteinID:KRH56099.1 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF724 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000294B52D | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:49257483..49259079
Molecular Weight (calculated)
7274.7 Da
IEP (calculated)
4.410
GRAVY (calculated)
0.073
Length
63 amino acids
Sequence
(BLAST)
(BLAST)
1: MFLLFLLKSS QVSDVEFSEA EEILIAMVYN LVGERWSLIA GRIPGRTAEE IEKYWTSRFS TSQ
1: MFRSDKAEKM DKRRRRQSKA KASCSEEVSS IEWEAVKMSE EEEDLISRMY KLVGDRWELI AGRIPGRTPE EIERYWLMKH GVVFANRRRD FFRK
Arabidopsis Description
CPCTranscription factor CPC [Source:UniProtKB/Swiss-Prot;Acc:O22059]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.