Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22538 | Soybean | nucleus | 82.67 | 82.67 |
| KRH56099 | Soybean | endoplasmic reticulum, nucleus | 54.67 | 65.08 |
| VIT_12s0059g02360.t01 | Wine grape | nucleus | 60.0 | 61.64 |
| KRH25406 | Soybean | nucleus | 57.33 | 58.9 |
| GSMUA_Achr9P11590_001 | Banana | nucleus | 58.67 | 55.7 |
| Solyc07g052490.2.1 | Tomato | nucleus | 52.0 | 46.43 |
| KRH77639 | Soybean | cytosol | 44.0 | 41.25 |
| KRH27851 | Soybean | cytosol | 42.67 | 40.0 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100801532 | MapMan:15.5.2.2 | EMBL:ACUP02007749 | EnsemblPlantsGene:GLYMA_12G195200 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7LVX5 | EnsemblPlants:KRH26818 | ProteinID:KRH26818 |
| ProteinID:KRH26818.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF724 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00005B0D34 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr12:-:35670647..35671634
Molecular Weight (calculated)
8435.7 Da
IEP (calculated)
4.836
GRAVY (calculated)
-0.825
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MADSDRSSSE VSTHSTDSGK RGSSKVEFSE DEETLIIRMY KLVGERWSLI AGRIPGRTAE EIEKYWTSRF SGSSE
1: MNTQRKSKHL KTNPTIVASS SEEVSSLEWE EIAMAQEEED LICRMYKLVG ERWDLIAGRI PGRTAEEIER FWVMKNHRRS QLR
Arabidopsis Description
ETC1MYB-like transcription factor ETC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNI5]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.