Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 5
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P18160_001 | Banana | nucleus | 21.09 | 45.59 |
| VIT_02s0025g04460.t01 | Wine grape | nucleus | 53.06 | 33.19 |
| VIT_16s0100g00380.t01 | Wine grape | nucleus | 44.9 | 30.28 |
| VIT_06s0061g01400.t01 | Wine grape | nucleus | 40.14 | 27.96 |
| VIT_08s0007g03790.t01 | Wine grape | nucleus, plastid | 34.69 | 24.06 |
| VIT_06s0061g01390.t01 | Wine grape | nucleus | 40.14 | 23.32 |
Protein Annotations
| Gene3D:3.30.730.10 | MapMan:35.1 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ProteinID:CCB51441 |
| ProteinID:CCB51441.1 | InterPro:DNA-bd_dom_sf | UniProt:F6HGV8 | EMBL:FN595756 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PIRSF:PIRSF038123 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31839 | PANTHER:PTHR31839:SF0 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI00021081F0 | ArrayExpress:VIT_11s0016g02140 | EnsemblPlantsGene:VIT_11s0016g02140 | EnsemblPlants:VIT_11s0016g02140.t01 | SEG:seg | : |
Description
No Description!
Coordinates
chr11:+:1758493..1761259
Molecular Weight (calculated)
17033.5 Da
IEP (calculated)
9.917
GRAVY (calculated)
-0.404
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLSVLKVGC YSGYDMEASE ALCHCLLLVY SRIYRRHDTQ YRGVRRRNGN MWVCELREPN KKSRIWLGTN QTAEMAARAH DVAALAFRGR KACLNFADSA
101: WSLPVVQYIS NSINFSSNFF HRRTTWCCPP RKVIEKQCTK SITSDKW
101: WSLPVVQYIS NSINFSSNFF HRRTTWCCPP RKVIEKQCTK SITSDKW
001: MNNDDIILAE MRPKKRAGRR VFKETRHPVY RGIRRRNGDK WVCEVREPTH QRRIWLGTYP TADMAARAHD VAVLALRGRS ACLNFADSAW RLPVPESNDP
101: DVIRRVAAEA AEMFRPVDLE SGITVLPCAG DDVDLGFGSG SGSGSGSEER NSSSYGFGDY EEVSTTMMRL AEGPLMSPPR SYMEDMTPTN VYTEEEMCYE
201: DMSLWSYRY
101: DVIRRVAAEA AEMFRPVDLE SGITVLPCAG DDVDLGFGSG SGSGSGSEER NSSSYGFGDY EEVSTTMMRL AEGPLMSPPR SYMEDMTPTN VYTEEEMCYE
201: DMSLWSYRY
Arabidopsis Description
DREB1FDehydration-responsive element-binding protein 1F [Source:UniProtKB/Swiss-Prot;Acc:Q9LN86]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.