Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0016g02140.t01 | Wine grape | nucleus | 45.59 | 21.09 |
| GSMUA_Achr6P13340_001 | Banana | nucleus | 52.94 | 18.85 |
| GSMUA_Achr11P... | Banana | nucleus | 57.35 | 18.75 |
| GSMUA_Achr8P11980_001 | Banana | nucleus | 55.88 | 18.01 |
| GSMUA_Achr7P05900_001 | Banana | nucleus | 52.94 | 17.48 |
| GSMUA_Achr2P20280_001 | Banana | nucleus | 47.06 | 15.92 |
| GSMUA_Achr8P16070_001 | Banana | nucleus, plastid | 44.12 | 15.54 |
| GSMUA_Achr10P... | Banana | nucleus | 51.47 | 15.49 |
| GSMUA_Achr4P19660_001 | Banana | mitochondrion, nucleus | 50.0 | 10.69 |
Protein Annotations
| Gene3D:3.30.730.10 | MapMan:35.2 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr3G18160_001 | EnsemblPlants:GSMUA_Achr3P18160_001 | EnsemblPlants:GSMUA_Achr3T18160_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0SFN2 | PFAM:PF00847 | PFscan:PS51032 | PANTHER:PTHR31985 |
| PANTHER:PTHR31985:SF77 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002968D95 | SEG:seg | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G18160_001]
Coordinates
chr3:+:19624446..19624652
Molecular Weight (calculated)
7502.8 Da
IEP (calculated)
9.913
GRAVY (calculated)
-0.429
Length
68 amino acids
Sequence
(BLAST)
(BLAST)
1: MGAERAAYGK HPTYHGVGSR NGKWVTEIRE PRKESRIWLG TYPTAEMAAV AYDVAKFFGG SVSSSFFS
001: MARQINIESS VSQVTFISSA IPAVSSSSSI TASASLSSSP TTSSSSSSST NSNFIEEDNS KRKASRRSLS SLVSVEDDDD QNGGGGKRRK TNGGDKHPTY
101: RGVRMRSWGK WVSEIREPRK KSRIWLGTYP TAEMAARAHD VAALAIKGTT AYLNFPKLAG ELPRPVTNSP KDIQAAASLA AVNWQDSVND VSNSEVAEIV
201: EAEPSRAVVA QLFSSDTSTT TTTQSQEYSE ASCASTSACT DKDSEEEKLF DLPDLFTDEN EMMIRNDAFC YYSSTWQLCG ADAGFRLEEP FFLSE
101: RGVRMRSWGK WVSEIREPRK KSRIWLGTYP TAEMAARAHD VAALAIKGTT AYLNFPKLAG ELPRPVTNSP KDIQAAASLA AVNWQDSVND VSNSEVAEIV
201: EAEPSRAVVA QLFSSDTSTT TTTQSQEYSE ASCASTSACT DKDSEEEKLF DLPDLFTDEN EMMIRNDAFC YYSSTWQLCG ADAGFRLEEP FFLSE
Arabidopsis Description
ERF034Ethylene-responsive transcription factor ERF034 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBQ7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.