Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32669 | Soybean | nucleus | 46.7 | 53.51 |
| VIT_06s0061g01400.t01 | Wine grape | nucleus | 51.42 | 51.66 |
| KRH20038 | Soybean | nucleus | 47.17 | 51.28 |
| VIT_06s0061g01390.t01 | Wine grape | nucleus | 51.42 | 43.08 |
| VIT_16s0100g00380.t01 | Wine grape | nucleus | 40.09 | 38.99 |
| VIT_02s0025g04460.t01 | Wine grape | nucleus | 41.04 | 37.02 |
| VIT_11s0016g02140.t01 | Wine grape | nucleus | 24.06 | 34.69 |
Protein Annotations
| EntrezGene:100266546 | wikigene:100266546 | MapMan:15.5.7.2 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| ProteinID:CCB55405 | ProteinID:CCB55405.1 | InterPro:DNA-bd_dom_sf | UniProt:F6HKI3 | EMBL:FN595991 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EntrezGene:LOC100266546 |
| wikigene:LOC100266546 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31839 | PANTHER:PTHR31839:SF8 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002109E4D | ArrayExpress:VIT_08s0007g03790 | EnsemblPlantsGene:VIT_08s0007g03790 | EnsemblPlants:VIT_08s0007g03790.t01 |
| RefSeq:XP_002277273 | RefSeq:XP_002277273.1 | RefSeq:XP_010654049.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr8:+:17765904..17766542
Molecular Weight (calculated)
23649.6 Da
IEP (calculated)
8.053
GRAVY (calculated)
-0.713
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPFERQVTS SFSVESSSSS SFSSSTRAPG SSSQTHEAGS SSQKRKAGRK KFKETRHPLY KGVRQRNGKW VCELRQPRKR NRIWLGTFPC PDMAARAYDV
101: AALAIKGDSA SLNFPESVSQ LPRAASSSIE DIRSAALKAA QTFEATEKEK EKEREDEDSD PCQLFVDEEA LFNMPTLLDS MAEGLILTPL ALKKGFNWNS
201: IKEAEDFTLW TD
101: AALAIKGDSA SLNFPESVSQ LPRAASSSIE DIRSAALKAA QTFEATEKEK EKEREDEDSD PCQLFVDEEA LFNMPTLLDS MAEGLILTPL ALKKGFNWNS
201: IKEAEDFTLW TD
001: MNPFYSTFPD SFLSISDHRS PVSDSSECSP KLASSCPKKR AGRKKFRETR HPIYRGVRQR NSGKWVCEVR EPNKKSRIWL GTFPTVEMAA RAHDVAALAL
101: RGRSACLNFA DSAWRLRIPE TTCPKEIQKA ASEAAMAFQN ETTTEGSKTA AEAEEAAGEG VREGERRAEE QNGGVFYMDD EALLGMPNFF ENMAEGMLLP
201: PPEVGWNHND FDGVGDVSLW SFDE
101: RGRSACLNFA DSAWRLRIPE TTCPKEIQKA ASEAAMAFQN ETTTEGSKTA AEAEEAAGEG VREGERRAEE QNGGVFYMDD EALLGMPNFF ENMAEGMLLP
201: PPEVGWNHND FDGVGDVSLW SFDE
Arabidopsis Description
DREB1DC-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:B2BJ26]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.