Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH20038 | Soybean | nucleus | 94.59 | 89.74 |
| VIT_08s0007g03790.t01 | Wine grape | nucleus, plastid | 53.51 | 46.7 |
| KRH25177 | Soybean | nucleus | 46.49 | 37.55 |
| KRH30499 | Soybean | nucleus | 46.49 | 36.44 |
| KRH26586 | Soybean | nucleus | 43.24 | 36.2 |
| KRH22718 | Soybean | nucleus | 46.49 | 35.39 |
| KRG91437 | Soybean | nucleus | 38.38 | 34.3 |
| KRH35383 | Soybean | nucleus | 37.84 | 34.15 |
| KRH26588 | Soybean | nucleus | 44.86 | 32.94 |
| KRH09144 | Soybean | nucleus | 40.54 | 32.47 |
| KRH77483 | Soybean | nucleus | 35.68 | 29.2 |
| KRH57258 | Soybean | nucleus | 38.92 | 28.35 |
| KRH03987 | Soybean | nucleus | 38.92 | 28.24 |
| KRH38616 | Soybean | plastid | 40.54 | 22.94 |
Protein Annotations
| EntrezGene:100813230 | MapMan:15.5.7.2 | Gene3D:3.30.730.10 | EMBL:ACUP02006148 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_10G067000 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | UniProt:K7LHT2 | EnsemblPlants:KRH32669 | ProteinID:KRH32669 |
| ProteinID:KRH32669.1 | PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31985 |
| PANTHER:PTHR31985:SF77 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000233CF78 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr10:-:6572361..6572918
Molecular Weight (calculated)
20805.4 Da
IEP (calculated)
8.085
GRAVY (calculated)
-0.526
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MQKRRAGRKK FHETRHPVYK GVRQRNGKWV SELRQPNNKN ARVWLGTFPH PDMAAIAYDV AALAFKGDSA SLNFPNAATS FPRLNSRTCS VRAIQFAATQ
101: AAEKHFSCVE SQQLQREGSG SGSFSLDDDS SEFSSQGRFF WDEEEVFNMP ELLNCMAEAL IITPPALERG FNWVGGETTV DLTLW
101: AAEKHFSCVE SQQLQREGSG SGSFSLDDDS SEFSSQGRFF WDEEEVFNMP ELLNCMAEAL IITPPALERG FNWVGGETTV DLTLW
001: MNSFSAFSEM FGSDYEPQGG DYCPTLATSC PKKPAGRKKF RETRHPIYRG VRQRNSGKWV SEVREPNKKT RIWLGTFQTA EMAARAHDVA ALALRGRSAC
101: LNFADSAWRL RIPESTCAKD IQKAAAEAAL AFQDETCDTT TTNHGLDMEE TMVEAIYTPE QSEGAFYMDE ETMFGMPTLL DNMAEGMLLP PPSVQWNHNY
201: DGEGDGDVSL WSY
101: LNFADSAWRL RIPESTCAKD IQKAAAEAAL AFQDETCDTT TTNHGLDMEE TMVEAIYTPE QSEGAFYMDE ETMFGMPTLL DNMAEGMLLP PPSVQWNHNY
201: DGEGDGDVSL WSY
Arabidopsis Description
DREB1BDRE/CRT-binding factor 1 [Source:UniProtKB/TrEMBL;Acc:B6DTR3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.