CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26588	Soybean	nucleus	83.54	80.56
KRH25177	Soybean	nucleus	58.02	61.57
KRH30499	Soybean	nucleus	58.02	59.75
Solyc01g009440.1.1	Tomato	nucleus	43.62	50.48
KRH26586	Soybean	nucleus	45.68	50.23
PGSC0003DMT400088795	Potato	nucleus	43.21	49.76
KRH32669	Soybean	nucleus	35.39	46.49
KRH20038	Soybean	nucleus	36.21	45.13
KRH35383	Soybean	nucleus	35.39	41.95
KRG91437	Soybean	nucleus	35.39	41.55
KRH09144	Soybean	nucleus	36.21	38.1
KRH77483	Soybean	nucleus	34.57	37.17
KRH57258	Soybean	nucleus	37.45	35.83
KRH03987	Soybean	nucleus	35.8	34.12
KRH38616	Soybean	plastid	36.63	27.22

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	UniProt:A0A0R0GWT9	EMBL:ACUP02008428	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_13G318500	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRH22718	ProteinID:KRH22718	ProteinID:KRH22718.1	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31839	PANTHER:PTHR31839:SF8	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI000233AAC3	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:41292696..41293427

Molecular Weight (calculated)

26849.5 Da

IEP (calculated)

7.874

GRAVY (calculated)

-0.459

Length

243 amino acids

Sequence
(BLAST)

001: MDVTMKKVES ESPYYCSSSS PSSTSSESKL SSASPCNPNS PPDPSSWHAE TSKKVVVLIP HKRKAGRKKF RETRHPVYRG VRQRNGNKWV CEVREPNKKS
101: RIWLGTYPSP EMAARAHDVA VLALKGTSAV FNFPDSVSLL PVANSSSAAD IRLAASKVSS VFGPSSSSSS RVETKPCLVD GFVKTENNVD EVKTVFFDEE
201: AFYNMPVFLD SMAEALLITP PSMKRAFDWD EVDCETDLTL WTD

Best Arabidopsis Sequence Match ( AT5G51990.1 )
(BLAST)

001: MNPFYSTFPD SFLSISDHRS PVSDSSECSP KLASSCPKKR AGRKKFRETR HPIYRGVRQR NSGKWVCEVR EPNKKSRIWL GTFPTVEMAA RAHDVAALAL
101: RGRSACLNFA DSAWRLRIPE TTCPKEIQKA ASEAAMAFQN ETTTEGSKTA AEAEEAAGEG VREGERRAEE QNGGVFYMDD EALLGMPNFF ENMAEGMLLP
201: PPEVGWNHND FDGVGDVSLW SFDE

Arabidopsis Description

DREB1DC-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:B2BJ26]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.