Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g009440.1.1 | Tomato | nucleus | 93.84 | 94.29 |
| KRH25177 | Soybean | nucleus | 47.39 | 43.67 |
| KRH22718 | Soybean | nucleus | 49.76 | 43.21 |
| KRH26588 | Soybean | nucleus | 51.18 | 42.86 |
| KRH26586 | Soybean | nucleus | 44.55 | 42.53 |
| PGSC0003DMT400037122 | Potato | nucleus | 43.6 | 42.4 |
| KRH30499 | Soybean | nucleus | 47.39 | 42.37 |
| PGSC0003DMT400037120 | Potato | nucleus | 43.13 | 38.56 |
| PGSC0003DMT400037119 | Potato | mitochondrion | 22.27 | 38.52 |
| PGSC0003DMT400037118 | Potato | mitochondrion | 23.22 | 37.69 |
| PGSC0003DMT400037121 | Potato | nucleus | 45.97 | 37.6 |
| PGSC0003DMT400032621 | Potato | nucleus | 42.18 | 36.48 |
| PGSC0003DMT400032622 | Potato | nucleus | 40.28 | 35.71 |
| PGSC0003DMT400010876 | Potato | nucleus | 34.6 | 35.27 |
| PGSC0003DMT400006896 | Potato | cytosol | 21.33 | 33.58 |
| PGSC0003DMT400032623 | Potato | nucleus | 37.44 | 31.73 |
| PGSC0003DMT400090651 | Potato | nucleus | 40.28 | 25.84 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M1DGQ8 |
| PFAM:PF00847 | EnsemblPlantsGene:PGSC0003DMG400038366 | PGSC:PGSC0003DMG400038366 | EnsemblPlants:PGSC0003DMT400088795 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31839 | PANTHER:PTHR31839:SF8 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000296514F | SEG:seg |
Description
CBF1 [Source:PGSC_GENE;Acc:PGSC0003DMG400038366]
Coordinates
chr1:-:7249526..7250161
Molecular Weight (calculated)
23845.1 Da
IEP (calculated)
5.812
GRAVY (calculated)
-0.651
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFEDALTSS SSSSSDHDNK EKNIDLSSCS TNNNNVQFKR RAGRKKFKET RHPLYRGVRR RNGEKWVCEI REPNKKTRIW LGTFSTPEIA ARAHDVAALA
101: LRGSNALLNF PGSAWSLPKA KSSSPQDIQI AVLQVNKELV VSSSPLEEPS CKPKDDEVNS LMEFMDEEAM FNMPIFIDSM AEGMLLTPPA MKRGFNWGDV
201: EEDVEFTLWK D
101: LRGSNALLNF PGSAWSLPKA KSSSPQDIQI AVLQVNKELV VSSSPLEEPS CKPKDDEVNS LMEFMDEEAM FNMPIFIDSM AEGMLLTPPA MKRGFNWGDV
201: EEDVEFTLWK D
001: MNSFSAFSEM FGSDYEPQGG DYCPTLATSC PKKPAGRKKF RETRHPIYRG VRQRNSGKWV SEVREPNKKT RIWLGTFQTA EMAARAHDVA ALALRGRSAC
101: LNFADSAWRL RIPESTCAKD IQKAAAEAAL AFQDETCDTT TTNHGLDMEE TMVEAIYTPE QSEGAFYMDE ETMFGMPTLL DNMAEGMLLP PPSVQWNHNY
201: DGEGDGDVSL WSY
101: LNFADSAWRL RIPESTCAKD IQKAAAEAAL AFQDETCDTT TTNHGLDMEE TMVEAIYTPE QSEGAFYMDE ETMFGMPTLL DNMAEGMLLP PPSVQWNHNY
201: DGEGDGDVSL WSY
Arabidopsis Description
DREB1BDRE/CRT-binding factor 1 [Source:UniProtKB/TrEMBL;Acc:B6DTR3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.