Factsheet for PGSC0003DMT400090651

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037119	Potato	mitochondrion	22.8	61.48
PGSC0003DMT400037118	Potato	mitochondrion	23.4	59.23
VIT_16s0100g00380.t01	Wine grape	nucleus	36.78	55.5
PGSC0003DMT400037122	Potato	nucleus	36.17	54.84
KRG91437	Soybean	nucleus	32.83	52.17
KRH35383	Soybean	nucleus	32.22	51.71
PGSC0003DMT400037120	Potato	nucleus	37.08	51.69
GSMUA_Achr6P13340_001	Banana	nucleus	29.48	50.79
AT1G63030.2	Thale cress	nucleus	26.75	48.62
PGSC0003DMT400037121	Potato	nucleus	37.99	48.45
KRH09144	Soybean	nucleus	33.74	48.05
Bra027612.1-P	Field mustard	nucleus	26.75	47.57
CDY49205	Canola	nucleus	26.75	47.57
GSMUA_Achr11P...	Banana	nucleus	29.48	46.63
GSMUA_Achr8P11980_001	Banana	nucleus	29.48	45.97
HORVU5Hr1G041600.1	Barley	nucleus	18.54	45.52
Bra016763.1-P	Field mustard	nucleus	27.05	44.06
CDY31270	Canola	nucleus	27.05	44.06
CDY71145	Canola	nucleus	27.05	44.06
CDY16016	Canola	nucleus	26.75	43.78
CDY57075	Canola	nucleus	27.36	43.48
Bra019777.1-P	Field mustard	nucleus	27.05	43.2
PGSC0003DMT400010876	Potato	nucleus	27.05	43.0
Bra026963.1-P	Field mustard	nucleus	26.75	42.93
CDY26574	Canola	nucleus	26.75	42.93
AT1G12610.1	Thale cress	nucleus	27.05	42.58
GSMUA_Achr7P05900_001	Banana	nucleus	26.44	42.23
PGSC0003DMT400006896	Potato	cytosol	17.02	41.79
GSMUA_Achr10P...	Banana	nucleus	28.57	41.59
PGSC0003DMT400032622	Potato	nucleus	29.18	40.34
GSMUA_Achr2P20280_001	Banana	nucleus	24.62	40.3
PGSC0003DMT400088795	Potato	nucleus	25.84	40.28
HORVU0Hr1G016540.1	Barley	nucleus	26.44	40.09
TraesCS6A01G256900.1	Wheat	nucleus	26.44	40.09
TraesCS6B01G268100.1	Wheat	nucleus	26.44	40.09
GSMUA_Achr8P16070_001	Banana	nucleus, plastid	23.4	39.9
Os01t0968800-00	Rice	nucleus	26.44	39.73
TraesCS6D01G238200.1	Wheat	nucleus	26.14	39.63
PGSC0003DMT400032621	Potato	nucleus	29.18	39.34
Os04t0572400-00	Rice	nucleus	26.14	39.27
Zm00001d002618_P001	Maize	nucleus	26.44	39.19
KRH57258	Soybean	nucleus	30.09	38.98
KRH77483	Soybean	nucleus	26.75	38.94
Os06t0127100-01	Rice	nucleus	25.23	38.78
Zm00001d052732_P001	Maize	plastid	26.14	38.56
TraesCS2A01G399500.1	Wheat	nucleus, plastid	25.53	38.53
KRH03987	Soybean	nucleus	29.79	38.43
Os02t0677300-02	Rice	nucleus	26.14	38.39
EES11288	Sorghum	nucleus	26.44	38.33
TraesCS5D01G318000.1	Wheat	nucleus	25.53	38.18
TraesCS2B01G002700.1	Wheat	nucleus, plastid	21.88	37.89
TraesCS2D01G397000.1	Wheat	nucleus	24.92	37.79
TraesCS5A01G311000.1	Wheat	nucleus	25.23	37.73
TraesCS2D01G015200.1	Wheat	nucleus	21.88	37.7
TraesCS5D01G318300.1	Wheat	nucleus	24.32	37.38
TraesCS5B01G311700.1	Wheat	nucleus	24.92	37.27
TraesCS5B01G312000.1	Wheat	nucleus	24.01	36.92
TraesCS5A01G310200.1	Wheat	nucleus	23.71	36.79
TraesCS5A01G311300.1	Wheat	nucleus	23.71	36.79
EES02136	Sorghum	nucleus	27.05	36.78
TraesCS7A01G057800.1	Wheat	nucleus, plastid	23.4	36.67
HORVU5Hr1G080310.1	Barley	nucleus	24.62	36.65
TraesCS4A01G433300.1	Wheat	nucleus	24.01	36.57
TraesCS5A01G310400.1	Wheat	nucleus	25.53	36.52
HORVU5Hr1G080350.1	Barley	nucleus	23.71	36.45
Zm00001d041981_P001	Maize	nucleus	27.05	36.33
TraesCS5D01G317200.1	Wheat	nucleus	23.4	36.15
TraesCS5B01G311200.1	Wheat	nucleus	24.92	36.12
TraesCS5D01G317300.1	Wheat	nucleus	25.23	36.09
TraesCS5B01G311400.1	Wheat	nucleus	24.32	36.04
TraesCS5A01G310600.1	Wheat	nucleus	24.62	36.0
Zm00001d017592_P001	Maize	nucleus	25.23	35.93
TraesCS5D01G317700.1	Wheat	nucleus	23.1	35.85
TraesCS5B01G311600.1	Wheat	nucleus	21.88	35.64
TraesCS5D01G317800.1	Wheat	nucleus	21.88	35.64
TraesCS1B01G335100.1	Wheat	nucleus	24.01	35.59
TraesCS5B01G310900.1	Wheat	nucleus	18.84	35.43
TraesCS5D01G317500.1	Wheat	nucleus	24.32	35.4
TraesCS5B01G311500.1	Wheat	nucleus	22.8	35.38
TraesCS5A01G311800.1	Wheat	plastid	26.14	35.25
TraesCS2B01G417500.1	Wheat	nucleus	22.8	35.21
TraesCS5D01G318600.1	Wheat	nucleus	24.92	35.19
TraesCS5A01G310700.1	Wheat	nucleus	23.71	35.14
HORVU5Hr1G080300.1	Barley	nucleus	24.01	35.11
PGSC0003DMT400032623	Potato	nucleus	26.44	34.94
TraesCS5A01G311700.1	Wheat	nucleus	24.62	34.76
HORVU5Hr1G080220.2	Barley	nucleus	23.4	34.38
TraesCS7D01G052600.1	Wheat	nucleus	23.4	34.38
TraesCS5B01G312300.1	Wheat	nucleus	24.32	34.33
TraesCS5D01G318400.1	Wheat	nucleus	24.92	34.31
KRH38616	Soybean	plastid	34.04	34.25
TraesCS7D01G052400.1	Wheat	nucleus	22.8	34.25
HORVU6Hr1G065580.4	Barley	nucleus, plastid	23.4	34.22
TraesCS4A01G433200.1	Wheat	nucleus	23.71	34.21
TraesCS7D01G052500.1	Wheat	nucleus	23.4	33.92
TraesCS5B01G312700.1	Wheat	nucleus	24.92	33.74
EER87753	Sorghum	nucleus	25.53	33.73
HORVU7Hr1G010510.2	Barley	nucleus	20.97	33.66
Os09t0522200-01	Rice	nucleus	24.32	33.61
TraesCS5A01G311500.1	Wheat	nucleus, plastid	24.32	33.61
HORVU5Hr1G080430.1	Barley	nucleus	24.62	33.61
TraesCS5B01G312100.1	Wheat	nucleus, plastid	24.32	33.47
TraesCS6A01G186400.1	Wheat	plastid	24.01	33.33
TraesCS7A01G057700.1	Wheat	nucleus	22.8	33.33
EER99212	Sorghum	nucleus, plastid	24.01	32.92
TraesCS5D01G318800.1	Wheat	nucleus, plastid	24.01	32.92
TraesCS5D01G318200.1	Wheat	nucleus, plastid	23.1	32.9
TraesCS5A01G310800.1	Wheat	nucleus	21.58	32.87
Zm00001d021207_P001	Maize	nucleus	23.71	32.77
EER99213	Sorghum	nucleus	23.4	32.77
Zm00001d036003_P001	Maize	nucleus	23.1	32.76
TraesCS5A01G311900.1	Wheat	nucleus	23.71	32.64
HORVU5Hr1G080340.1	Barley	nucleus, plastid	23.1	32.62
Zm00001d006170_P001	Maize	nucleus	22.8	32.61
TraesCS5B01G312800.1	Wheat	plastid	23.71	32.5
Zm00001d021208_P001	Maize	plastid	22.8	32.47
TraesCS5B01G312900.1	Wheat	nucleus	24.01	32.38
TraesCS6B01G218000.1	Wheat	plastid	24.01	32.38
TraesCS5B01G313000.1	Wheat	nucleus	23.1	32.2
TraesCS6D01G173500.1	Wheat	plastid	23.71	32.1
TraesCS5A01G310000.1	Wheat	plastid	24.01	31.98
TraesCS6A01G381200.1	Wheat	plastid	23.71	31.84
Zm00001d031728_P001	Maize	nucleus, plastid	21.88	31.72
Os09t0522100-00	Rice	nucleus	23.71	31.71
EER99214	Sorghum	plastid	23.4	31.56
TraesCS5D01G318900.1	Wheat	nucleus	22.8	31.51
HORVU5Hr1G080440.2	Barley	nucleus, plastid	23.4	31.43
TraesCS6D01G365800.1	Wheat	nucleus	23.4	31.43
TraesCS5B01G311900.1	Wheat	plastid	22.19	31.2
TraesCS5D01G318100.1	Wheat	nucleus, plastid	22.19	31.2
TraesCS6D01G366100.1	Wheat	nucleus	23.1	31.15
TraesCS6B01G420100.1	Wheat	nucleus	23.1	31.02
TraesCS5A01G312000.1	Wheat	plastid	22.8	30.99
TraesCS6A01G381000.1	Wheat	nucleus	23.1	30.89
Zm00001d021205_P001	Maize	plastid	23.1	30.89
TraesCS5A01G311100.1	Wheat	nucleus	21.88	30.77
EES14131	Sorghum	nucleus, plastid	22.19	30.42
HORVU6Hr1G089320.1	Barley	nucleus	20.67	30.36
HORVU5Hr1G080380.1	Barley	nucleus, plastid	24.01	29.48
HORVU5Hr1G080420.1	Barley	nucleus, plastid	25.23	29.23
TraesCS5D01G318500.1	Wheat	nucleus	21.58	29.22
TraesCS5A01G310100.1	Wheat	nucleus	23.71	29.0
TraesCS5B01G310800.1	Wheat	nucleus	23.71	29.0
TraesCS5A01G311600.1	Wheat	nucleus	21.58	28.98
TraesCS5B01G312200.1	Wheat	nucleus	21.58	28.98
TraesCS5D01G317100.1	Wheat	nucleus, plastid	23.4	28.62
HORVU5Hr1G080400.1	Barley	nucleus, plastid	9.12	28.57
TraesCS5D01G317900.1	Wheat	nucleus	20.67	28.33
GSMUA_Achr4P19660_001	Banana	mitochondrion, nucleus	27.36	28.3
TraesCS5A01G310500.1	Wheat	nucleus, plastid	23.4	28.0
TraesCS5A01G310900.1	Wheat	mitochondrion	14.89	27.84
TraesCS5D01G317600.1	Wheat	nucleus, plastid	18.84	27.8
Zm00001d006169_P001	Maize	plastid	22.19	27.65
EER99211	Sorghum	plastid	23.1	27.64
TraesCS5D01G317400.1	Wheat	nucleus	23.1	27.64
HORVU5Hr1G080230.1	Barley	nucleus	22.8	25.77
HORVU5Hr1G080450.1	Barley	nucleus, plastid	23.1	25.25
OQU89795	Sorghum	mitochondrion, nucleus	25.53	25.07
OQU85641	Sorghum	nucleus	25.23	24.92
TraesCS5B01G311300.1	Wheat	nucleus	21.88	24.83
Os06t0165600-01	Rice	nucleus, plastid	17.93	23.32

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:M1DKV5
PFAM:PF00847	EnsemblPlantsGene:PGSC0003DMG400040222	PGSC:PGSC0003DMG400040222	EnsemblPlants:PGSC0003DMT400090651	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31839	PANTHER:PTHR31839:SF8	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00029607C0	SEG:seg

Description

Dehydration-responsive element-binding protein 1B [Source:PGSC_GENE;Acc:PGSC0003DMG400040222]

Coordinates

chr11:-:43909444..43910433

Molecular Weight (calculated)

36722.1 Da

IEP (calculated)

4.722

GRAVY (calculated)

-0.395

Length

329 amino acids

Sequence
(BLAST)

001: MLLLASKIPK KRGGRKKFRE TRHPVYRGVR WKNFEKWVSE VRVPGKKSRI WLGTFPNAEM AARAHDVAVM ALKGRSACLN FADSAWRLPV PASATAKDIQ
101: KAAAEATETF RASESLEREN SEEVVVNNDD HYVVDSGWRL AIPASAAARD IQKATAEAAE AFRPSESSKG EYFEEVDSTW RLSISASAAA KHIQKAAAEA
201: FCHSESSEGE NYSEEVIIND DQLITQYLID STWRLPIPAS VAAKAATEAF CPSKSSEGEN SEEVTIDEQV IQDIVVPKFT EYNELFMDEE AIFYMPELLV
301: NMAEGLMLPP PQCTYGMEPH DIDMSLWSY

Best Arabidopsis Sequence Match ( AT1G12610.1 )
(BLAST)

001: MNNDDIILAE MRPKKRAGRR VFKETRHPVY RGIRRRNGDK WVCEVREPTH QRRIWLGTYP TADMAARAHD VAVLALRGRS ACLNFADSAW RLPVPESNDP
101: DVIRRVAAEA AEMFRPVDLE SGITVLPCAG DDVDLGFGSG SGSGSGSEER NSSSYGFGDY EEVSTTMMRL AEGPLMSPPR SYMEDMTPTN VYTEEEMCYE
201: DMSLWSYRY

Arabidopsis Description

DREB1FDehydration-responsive element-binding protein 1F [Source:UniProtKB/Swiss-Prot;Acc:Q9LN86]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.