Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- cytosol 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G034070.1 | |
| HORVU5Hr1G095400.7 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G25490.1 | HORVU1Hr1G034070.1 | AT3G54610.1 | 16603259 |
| AT4G25490.1 | HORVU5Hr1G095400.7 | AT4G16420.1 | 16603259 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G318100.1 | Wheat | nucleus, plastid | 89.7 | 89.32 |
| TraesCS5A01G311100.1 | Wheat | nucleus | 89.7 | 89.32 |
| TraesCS5B01G311900.1 | Wheat | plastid | 88.84 | 88.46 |
| TraesCS5D01G318200.1 | Wheat | nucleus, plastid | 86.27 | 87.01 |
| HORVU5Hr1G080440.2 | Barley | nucleus, plastid | 63.52 | 60.41 |
| Os09t0522100-00 | Rice | nucleus | 58.8 | 55.69 |
| HORVU6Hr1G089320.1 | Barley | nucleus | 53.22 | 55.36 |
| HORVU5Hr1G080380.1 | Barley | nucleus, plastid | 61.37 | 53.36 |
| HORVU5Hr1G080430.1 | Barley | nucleus | 54.94 | 53.11 |
| Zm00001d021205_P001 | Maize | plastid | 55.79 | 52.85 |
| Zm00001d006169_P001 | Maize | plastid | 57.51 | 50.76 |
| EER99211 | Sorghum | plastid | 57.08 | 48.36 |
| HORVU5Hr1G041600.1 | Barley | nucleus | 27.47 | 47.76 |
| HORVU5Hr1G080420.1 | Barley | nucleus, plastid | 57.08 | 46.83 |
| HORVU5Hr1G080400.1 | Barley | nucleus, plastid | 20.6 | 45.71 |
| HORVU5Hr1G080300.1 | Barley | nucleus | 42.06 | 43.56 |
| HORVU5Hr1G080350.1 | Barley | nucleus | 39.06 | 42.52 |
| HORVU5Hr1G080310.1 | Barley | nucleus | 39.91 | 42.08 |
| Bra027612.1-P | Field mustard | nucleus | 33.05 | 41.62 |
| CDY49205 | Canola | nucleus | 33.05 | 41.62 |
| HORVU0Hr1G016540.1 | Barley | nucleus | 38.63 | 41.47 |
| Solyc03g026280.2.1 | Tomato | nucleus | 36.91 | 40.95 |
| AT1G63030.2 | Thale cress | nucleus | 31.76 | 40.88 |
| PGSC0003DMT400037122 | Potato | nucleus | 37.77 | 40.55 |
| Solyc03g026270.1.1 | Tomato | nucleus | 35.62 | 40.49 |
| HORVU5Hr1G080220.2 | Barley | nucleus | 38.2 | 39.73 |
| Bra019777.1-P | Field mustard | nucleus | 34.76 | 39.32 |
| CDY52356 | Canola | nucleus | 36.48 | 39.17 |
| CDY57075 | Canola | nucleus | 34.76 | 39.13 |
| PGSC0003DMT400010876 | Potato | nucleus | 34.76 | 39.13 |
| Solyc03g124110.1.1 | Tomato | nucleus | 36.91 | 39.09 |
| KRH35383 | Soybean | nucleus | 34.33 | 39.02 |
| CDY16016 | Canola | nucleus | 33.48 | 38.81 |
| CDY70584 | Canola | nucleus | 35.62 | 38.78 |
| Bra019162.1-P | Field mustard | nucleus | 35.62 | 38.78 |
| KRG91437 | Soybean | nucleus | 34.33 | 38.65 |
| Bra016763.1-P | Field mustard | nucleus | 33.48 | 38.61 |
| CDY71145 | Canola | nucleus | 33.48 | 38.61 |
| AT4G25480.1 | Thale cress | nucleus | 35.62 | 38.43 |
| Solyc12g056430.1.1 | Tomato | nucleus | 33.48 | 38.42 |
| CDY66018 | Canola | nucleus | 35.19 | 38.32 |
| CDX92710 | Canola | nucleus | 35.19 | 38.14 |
| VIT_16s0100g00380.t01 | Wine grape | nucleus | 35.62 | 38.07 |
| CDY26574 | Canola | nucleus | 33.48 | 38.05 |
| Bra026963.1-P | Field mustard | nucleus | 33.48 | 38.05 |
| VIT_02s0025g04460.t01 | Wine grape | nucleus | 38.2 | 37.87 |
| CDX84868 | Canola | nucleus | 34.76 | 37.85 |
| Bra022770.1-P | Field mustard | nucleus | 34.76 | 37.85 |
| CDY31270 | Canola | nucleus | 32.62 | 37.62 |
| AT4G25490.1 | Thale cress | nucleus | 34.33 | 37.56 |
| CDY52360 | Canola | nucleus | 35.62 | 37.56 |
| CDY65499 | Canola | nucleus | 34.76 | 37.5 |
| AT1G12610.1 | Thale cress | nucleus | 33.48 | 37.32 |
| HORVU5Hr1G080450.1 | Barley | nucleus, plastid | 48.07 | 37.21 |
| CDY00510 | Canola | nucleus | 34.76 | 36.82 |
| Bra028290.1-P | Field mustard | nucleus | 34.76 | 36.82 |
| AT4G25470.1 | Thale cress | nucleus | 33.91 | 36.57 |
| HORVU6Hr1G065580.4 | Barley | nucleus, plastid | 35.19 | 36.44 |
| PGSC0003DMT400037120 | Potato | nucleus | 36.91 | 36.44 |
| CDY31925 | Canola | nucleus | 34.33 | 36.36 |
| PGSC0003DMT400037118 | Potato | mitochondrion | 20.17 | 36.15 |
| PGSC0003DMT400032622 | Potato | nucleus | 36.91 | 36.13 |
| Solyc08g007820.1.1 | Tomato | nucleus | 37.77 | 36.07 |
| PGSC0003DMT400037119 | Potato | mitochondrion | 18.88 | 36.07 |
| KRH77483 | Soybean | nucleus | 34.76 | 35.84 |
| PGSC0003DMT400032621 | Potato | nucleus | 37.34 | 35.66 |
| AT5G51990.1 | Thale cress | nucleus | 33.91 | 35.27 |
| PGSC0003DMT400037121 | Potato | nucleus | 38.2 | 34.5 |
| HORVU7Hr1G010510.2 | Barley | nucleus | 30.04 | 34.15 |
| Solyc08g007830.1.1 | Tomato | nucleus | 33.48 | 34.06 |
| KRH57258 | Soybean | nucleus | 36.91 | 33.86 |
| HORVU5Hr1G080230.1 | Barley | nucleus | 42.06 | 33.68 |
| KRH03987 | Soybean | nucleus | 36.48 | 33.33 |
| CDY52358 | Canola | nucleus | 27.04 | 33.33 |
| KRH09144 | Soybean | nucleus | 32.62 | 32.9 |
| Bra010461.1-P | Field mustard | nucleus | 36.05 | 32.56 |
| CDY66013 | Canola | nucleus | 26.61 | 32.46 |
| PGSC0003DMT400032623 | Potato | nucleus | 33.48 | 31.33 |
| Bra010460.1-P | Field mustard | nucleus | 35.62 | 30.18 |
| PGSC0003DMT400006896 | Potato | cytosol | 16.74 | 29.1 |
| Bra010463.1-P | Field mustard | nucleus | 27.9 | 29.02 |
| KRH38616 | Soybean | plastid | 32.62 | 23.24 |
| PGSC0003DMT400090651 | Potato | nucleus | 32.62 | 23.1 |
Protein Annotations
| Gene3D:3.30.730.10 | MapMan:35.1 | ProteinID:AGW47708.1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU5Hr1G080340 | EnsemblPlants:HORVU5Hr1G080340.1 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0YYJ0 | PFAM:PF00847 | PFscan:PS51032 | PANTHER:PTHR31839 |
| PANTHER:PTHR31839:SF5 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000295F30D | SEG:seg | : |
Description
CBF12C [Source:UniProtKB/TrEMBL;Acc:M0YYJ0]
Coordinates
chrchr5H:+:559980210..559980911
Molecular Weight (calculated)
24900.4 Da
IEP (calculated)
4.914
GRAVY (calculated)
-0.082
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVGIDCWIS SPSSSTSGHE LGVAVPVWSP AAKRPAGRTK FKETRHPVYR GVRRRGSAGR WVCEVRVPGK RGERIWLGTY VAAESAARAH DAAMLALLGR
101: STSAAACLNF PDSAWLLVLP PKLTDLADVR RAATEAVAGF LRMEAAVVPI LDEATSPVYL PSSVDNADDV FQVPAFSAQG SDMFELDMSG EMDLDAYYAG
201: FAQGMLLEPP PTPSHWENGE CGDGAAAAGL WSY
101: STSAAACLNF PDSAWLLVLP PKLTDLADVR RAATEAVAGF LRMEAAVVPI LDEATSPVYL PSSVDNADDV FQVPAFSAQG SDMFELDMSG EMDLDAYYAG
201: FAQGMLLEPP PTPSHWENGE CGDGAAAAGL WSY
001: MNSFSAFSEM FGSDYESPVS SGGDYSPKLA TSCPKKPAGR KKFRETRHPI YRGVRQRNSG KWVCELREPN KKTRIWLGTF QTAEMAARAH DVAAIALRGR
101: SACLNFADSA WRLRIPESTC AKEIQKAAAE AALNFQDEMC HMTTDAHGLD MEETLVEAIY TPEQSQDAFY MDEEAMLGMS SLLDNMAEGM LLPSPSVQWN
201: YNFDVEGDDD VSLWSY
101: SACLNFADSA WRLRIPESTC AKEIQKAAAE AALNFQDEMC HMTTDAHGLD MEETLVEAIY TPEQSQDAFY MDEEAMLGMS SLLDNMAEGM LLPSPSVQWN
201: YNFDVEGDDD VSLWSY
Arabidopsis Description
DREB1CC-repeat binding factor 2 [Source:UniProtKB/TrEMBL;Acc:B2BIW9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.