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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY00510 Canola nucleus 96.82 96.82
Bra028290.1-P Field mustard nucleus 96.36 96.36
AT5G51990.1 Thale cress nucleus 80.91 79.46
CDY70584 Canola nucleus 65.91 67.76
CDY66018 Canola nucleus 65.0 66.82
CDX92710 Canola nucleus 64.55 66.05
CDX84868 Canola nucleus 63.64 65.42
CDY52356 Canola nucleus 63.64 64.52
CDY52360 Canola nucleus 61.82 61.54
CDY65499 Canola nucleus 57.73 58.8
CDY66013 Canola nucleus 48.18 55.5
CDY52358 Canola nucleus 47.27 55.03
CDY49205 Canola nucleus 44.09 52.43
HORVU5Hr1G041600.1 Barley nucleus 30.0 49.25
GSMUA_Achr11P... Banana nucleus 46.36 49.04
GSMUA_Achr6P13340_001 Banana nucleus 42.27 48.69
GSMUA_Achr7P05900_001 Banana nucleus 45.45 48.54
CDY71145 Canola nucleus 44.55 48.51
GSMUA_Achr8P11980_001 Banana nucleus 46.36 48.34
CDY16016 Canola nucleus 44.09 48.26
CDY26574 Canola nucleus 44.55 47.8
HORVU0Hr1G016540.1 Barley nucleus 46.82 47.47
TraesCS6A01G256900.1 Wheat nucleus 46.82 47.47
TraesCS6B01G268100.1 Wheat nucleus 46.82 47.47
CDY31270 Canola nucleus 43.18 47.03
TraesCS6D01G238200.1 Wheat nucleus 46.36 47.0
CDY57075 Canola nucleus 44.09 46.86
Os02t0677300-02 Rice nucleus 46.36 45.54
GSMUA_Achr2P20280_001 Banana nucleus 40.0 43.78
GSMUA_Achr8P16070_001 Banana nucleus, plastid 38.18 43.52
Os04t0572400-00 Rice nucleus 43.18 43.38
TraesCS2A01G399500.1 Wheat nucleus, plastid 42.73 43.12
GSMUA_Achr10P... Banana nucleus 44.09 42.92
Zm00001d017592_P001 Maize nucleus 45.0 42.86
TraesCS2D01G397000.1 Wheat nucleus 41.36 41.94
Zm00001d002618_P001 Maize nucleus 42.27 41.89
EES11288 Sorghum nucleus 43.18 41.85
HORVU6Hr1G065580.4 Barley nucleus, plastid 42.73 41.78
Os06t0127100-01 Rice nucleus 39.55 40.65
TraesCS2B01G417500.1 Wheat nucleus 39.09 40.38
TraesCS2B01G002700.1 Wheat nucleus, plastid 34.55 40.0
TraesCS4A01G433300.1 Wheat nucleus 39.09 39.81
TraesCS2D01G015200.1 Wheat nucleus 34.55 39.79
TraesCS7A01G057800.1 Wheat nucleus, plastid 37.27 39.05
Os01t0968800-00 Rice nucleus 38.64 38.81
TraesCS5B01G310900.1 Wheat nucleus 30.45 38.29
TraesCS5B01G311600.1 Wheat nucleus 35.0 38.12
HORVU7Hr1G010510.2 Barley nucleus 35.45 38.05
TraesCS7D01G052600.1 Wheat nucleus 38.64 37.95
TraesCS5A01G310200.1 Wheat nucleus 36.36 37.74
Zm00001d036003_P001 Maize nucleus 39.55 37.5
TraesCS7D01G052500.1 Wheat nucleus 38.64 37.44
TraesCS5B01G311400.1 Wheat nucleus 37.73 37.39
TraesCS5A01G310600.1 Wheat nucleus 38.18 37.33
TraesCS5A01G311000.1 Wheat nucleus 37.27 37.27
TraesCS5D01G318000.1 Wheat nucleus 37.27 37.27
TraesCS5D01G317800.1 Wheat nucleus 34.09 37.13
TraesCS5D01G317200.1 Wheat nucleus 35.91 37.09
TraesCS5A01G310400.1 Wheat nucleus 38.64 36.96
TraesCS1B01G335100.1 Wheat nucleus 37.27 36.94
TraesCS5A01G310700.1 Wheat nucleus 37.27 36.94
HORVU5Hr1G080350.1 Barley nucleus 35.91 36.92
TraesCS7A01G057700.1 Wheat nucleus 37.73 36.89
EES02136 Sorghum nucleus 40.45 36.78
TraesCS5D01G317500.1 Wheat nucleus 37.73 36.73
HORVU5Hr1G080220.2 Barley nucleus 37.27 36.61
TraesCS7D01G052400.1 Wheat nucleus 36.36 36.53
TraesCS5D01G317300.1 Wheat nucleus 38.18 36.52
TraesCS5B01G312000.1 Wheat nucleus 35.45 36.45
TraesCS5B01G311700.1 Wheat nucleus 36.36 36.36
TraesCS5A01G311300.1 Wheat nucleus 35.0 36.32
TraesCS5D01G317700.1 Wheat nucleus 35.0 36.32
TraesCS5B01G311200.1 Wheat nucleus 37.27 36.12
TraesCS5D01G318300.1 Wheat nucleus 35.0 35.98
TraesCS4A01G433200.1 Wheat nucleus 37.27 35.96
Zm00001d041981_P001 Maize nucleus 40.0 35.92
HORVU5Hr1G080310.1 Barley nucleus 35.91 35.75
HORVU5Hr1G080300.1 Barley nucleus 36.36 35.56
TraesCS5B01G311500.1 Wheat nucleus 34.09 35.38
TraesCS5A01G311700.1 Wheat nucleus 37.27 35.19
TraesCS5D01G318600.1 Wheat nucleus 37.27 35.19
TraesCS5B01G312300.1 Wheat nucleus 36.82 34.76
TraesCS5A01G310800.1 Wheat nucleus 34.09 34.72
EER87753 Sorghum nucleus 39.09 34.54
HORVU5Hr1G080340.1 Barley nucleus, plastid 36.36 34.33
HORVU5Hr1G080400.1 Barley nucleus, plastid 16.36 34.29
TraesCS5D01G318200.1 Wheat nucleus, plastid 35.91 34.2
GSMUA_Achr4P19660_001 Banana mitochondrion, nucleus 48.18 33.33
TraesCS5B01G312700.1 Wheat nucleus 36.82 33.33
TraesCS5A01G311800.1 Wheat plastid 36.82 33.2
Zm00001d052732_P001 Maize plastid 33.18 32.74
TraesCS5D01G318400.1 Wheat nucleus 35.45 32.64
HORVU5Hr1G080440.2 Barley nucleus, plastid 35.91 32.24
Zm00001d006170_P001 Maize nucleus 33.64 32.17
Zm00001d031728_P001 Maize nucleus, plastid 33.18 32.16
EER99212 Sorghum nucleus, plastid 35.0 32.08
HORVU5Hr1G080430.1 Barley nucleus 35.0 31.95
TraesCS5A01G311500.1 Wheat nucleus, plastid 34.55 31.93
Zm00001d021207_P001 Maize nucleus 34.55 31.93
TraesCS6A01G381200.1 Wheat plastid 35.45 31.84
TraesCS5B01G312100.1 Wheat nucleus, plastid 34.55 31.8
Zm00001d021205_P001 Maize plastid 35.45 31.71
TraesCS5B01G312800.1 Wheat plastid 34.55 31.67
TraesCS6A01G186400.1 Wheat plastid 34.09 31.65
Zm00001d021208_P001 Maize plastid 33.18 31.6
TraesCS6B01G218000.1 Wheat plastid 35.0 31.56
Os09t0522200-01 Rice nucleus 34.09 31.51
EER99213 Sorghum nucleus 33.64 31.49
TraesCS6D01G365800.1 Wheat nucleus 35.0 31.43
TraesCS5A01G311900.1 Wheat nucleus 34.09 31.38
TraesCS6D01G173500.1 Wheat plastid 34.55 31.28
EES14131 Sorghum nucleus, plastid 34.09 31.25
TraesCS5D01G318800.1 Wheat nucleus, plastid 34.09 31.25
TraesCS5A01G310100.1 Wheat nucleus 38.18 31.23
TraesCS5B01G310800.1 Wheat nucleus 38.18 31.23
TraesCS5A01G311100.1 Wheat nucleus 33.18 31.2
TraesCS5B01G311900.1 Wheat plastid 33.18 31.2
TraesCS5D01G318100.1 Wheat nucleus, plastid 33.18 31.2
TraesCS5A01G310000.1 Wheat plastid 35.0 31.17
TraesCS6D01G366100.1 Wheat nucleus 34.55 31.15
TraesCS6B01G420100.1 Wheat nucleus 34.55 31.02
TraesCS5B01G313000.1 Wheat nucleus 33.18 30.93
TraesCS6A01G381000.1 Wheat nucleus 34.55 30.89
HORVU6Hr1G089320.1 Barley nucleus 31.36 30.8
TraesCS5B01G312900.1 Wheat nucleus 34.09 30.74
TraesCS5D01G318900.1 Wheat nucleus 33.18 30.67
TraesCS5A01G312000.1 Wheat plastid 33.64 30.58
Os09t0522100-00 Rice nucleus 34.09 30.49
TraesCS5D01G317100.1 Wheat nucleus, plastid 37.27 30.48
TraesCS5D01G317900.1 Wheat nucleus 33.18 30.42
TraesCS5A01G311600.1 Wheat nucleus 33.64 30.2
TraesCS5B01G312200.1 Wheat nucleus 33.64 30.2
TraesCS5A01G310500.1 Wheat nucleus, plastid 37.73 30.18
TraesCS5D01G318500.1 Wheat nucleus 33.18 30.04
EER99214 Sorghum plastid 33.18 29.92
TraesCS5D01G317400.1 Wheat nucleus 37.27 29.82
OQU85641 Sorghum nucleus 45.0 29.73
TraesCS5D01G317600.1 Wheat nucleus, plastid 30.0 29.6
HORVU5Hr1G080420.1 Barley nucleus, plastid 36.82 28.52
Zm00001d006169_P001 Maize plastid 34.09 28.41
EER99211 Sorghum plastid 35.0 28.0
HORVU5Hr1G080230.1 Barley nucleus 36.36 27.49
HORVU5Hr1G080380.1 Barley nucleus, plastid 33.18 27.24
TraesCS5A01G310900.1 Wheat mitochondrion 20.45 25.57
TraesCS5B01G311300.1 Wheat nucleus 33.64 25.52
HORVU5Hr1G080450.1 Barley nucleus, plastid 33.64 24.58
OQU89795 Sorghum mitochondrion, nucleus 35.91 23.58
Os06t0165600-01 Rice nucleus, plastid 25.91 22.53
Protein Annotations
MapMan:15.5.7.2MapMan:26.4.3.4.2Gene3D:3.30.730.10GO:A0A078GZP6UniProt:A0A078GZP6InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sfEnsemblPlants:CDY31925ProteinID:CDY31925ProteinID:CDY31925.1InterPro:DNA-bd_dom_sfGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00050697001InterPro:IPR001471InterPro:IPR036955
PFAM:PF00847PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31839PANTHER:PTHR31839:SF8SMART:SM00380
SUPFAM:SSF54171UniParc:UPI0004EB9E62SEG:seg:::
Description
BnaC09g28190DBnaC09g28190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZP6]
Coordinates
chrLK032282:+:388034..388696
Molecular Weight (calculated)
24520.0 Da
IEP (calculated)
6.518
GRAVY (calculated)
-0.515
Length
220 amino acids
Sequence
(BLAST)
001: MDPFYTSFSD SFLSIPDHRS PVSDSSECSP KLASSCPKKR AGRKKFRETR HPIYRGVRQR NSGKWVCEVR EPNKKSRIWL GTFPTVEMAA RAHDVAALAL
101: RGRSACLNFA DSAWRLRIPE STCPKEIQRA AAEAAMAFQN KTATTETTMV EAVKPAEETV GQTGGETMEE NGVFYMAEEA VLGMPRFLEN MGEEMLLPPP
201: ELGWNHNDLA GDADVSLWSF
Best Arabidopsis Sequence Match ( AT5G51990.1 )
(BLAST)
001: MNPFYSTFPD SFLSISDHRS PVSDSSECSP KLASSCPKKR AGRKKFRETR HPIYRGVRQR NSGKWVCEVR EPNKKSRIWL GTFPTVEMAA RAHDVAALAL
101: RGRSACLNFA DSAWRLRIPE TTCPKEIQKA ASEAAMAFQN ETTTEGSKTA AEAEEAAGEG VREGERRAEE QNGGVFYMDD EALLGMPNFF ENMAEGMLLP
201: PPEVGWNHND FDGVGDVSLW SFDE
Arabidopsis Description
DREB1DC-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:B2BJ26]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.