Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- nucleus 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d013265_P003 | |
| Zm00001d014175_P004 | |
| Zm00001d034033_P002 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G25490.1 | Zm00001d014175_P004 | AT3G54610.1 | 16603259 |
| AT4G25490.1 | Zm00001d013265_P003 | AT4G16420.1 | 16603259 |
| AT4G25490.1 | Zm00001d034033_P002 | AT4G16420.1 | 16603259 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d021205_P001 | Maize | plastid | 72.35 | 77.64 |
| EER99211 | Sorghum | plastid | 78.79 | 75.64 |
| Os09t0522100-00 | Rice | nucleus | 57.95 | 62.2 |
| TraesCS6A01G186400.1 | Wheat | plastid | 55.3 | 61.6 |
| TraesCS6B01G218000.1 | Wheat | plastid | 56.44 | 61.07 |
| TraesCS5A01G311700.1 | Wheat | nucleus | 53.03 | 60.09 |
| TraesCS6D01G173500.1 | Wheat | plastid | 54.92 | 59.67 |
| TraesCS5B01G312300.1 | Wheat | nucleus | 52.65 | 59.66 |
| TraesCS5D01G318600.1 | Wheat | nucleus | 52.65 | 59.66 |
| TraesCS5B01G312700.1 | Wheat | nucleus | 54.55 | 59.26 |
| TraesCS5A01G311800.1 | Wheat | plastid | 54.17 | 58.61 |
| TraesCS6A01G381200.1 | Wheat | plastid | 54.17 | 58.37 |
| TraesCS6D01G366100.1 | Wheat | nucleus | 53.79 | 58.2 |
| TraesCS5A01G311100.1 | Wheat | nucleus | 51.52 | 58.12 |
| TraesCS6B01G420100.1 | Wheat | nucleus | 53.79 | 57.96 |
| TraesCS6D01G365800.1 | Wheat | nucleus | 53.79 | 57.96 |
| TraesCS5B01G311900.1 | Wheat | plastid | 51.14 | 57.69 |
| TraesCS5D01G318200.1 | Wheat | nucleus, plastid | 50.38 | 57.58 |
| HORVU5Hr1G080340.1 | Barley | nucleus, plastid | 50.76 | 57.51 |
| HORVU6Hr1G089320.1 | Barley | nucleus | 48.11 | 56.7 |
| TraesCS5B01G312800.1 | Wheat | plastid | 51.52 | 56.67 |
| TraesCS5D01G318100.1 | Wheat | nucleus, plastid | 50.0 | 56.41 |
| TraesCS6A01G381000.1 | Wheat | nucleus | 52.27 | 56.1 |
| TraesCS5B01G312100.1 | Wheat | nucleus, plastid | 50.76 | 56.07 |
| TraesCS5D01G318400.1 | Wheat | nucleus | 50.76 | 56.07 |
| TraesCS5A01G311500.1 | Wheat | nucleus, plastid | 50.0 | 55.46 |
| TraesCS5A01G311900.1 | Wheat | nucleus | 50.0 | 55.23 |
| Zm00001d006170_P001 | Maize | nucleus | 48.11 | 55.22 |
| HORVU5Hr1G080430.1 | Barley | nucleus | 50.38 | 55.19 |
| HORVU5Hr1G080440.2 | Barley | nucleus, plastid | 51.14 | 55.1 |
| TraesCS5D01G318800.1 | Wheat | nucleus, plastid | 50.0 | 55.0 |
| TraesCS5B01G312900.1 | Wheat | nucleus | 50.38 | 54.51 |
| TraesCS5A01G310000.1 | Wheat | plastid | 50.76 | 54.25 |
| Zm00001d021207_P001 | Maize | nucleus | 47.73 | 52.94 |
| Zm00001d052732_P001 | Maize | plastid | 44.7 | 52.91 |
| TraesCS5D01G318500.1 | Wheat | nucleus | 48.48 | 52.67 |
| TraesCS5A01G311600.1 | Wheat | nucleus | 48.48 | 52.24 |
| Zm00001d021208_P001 | Maize | plastid | 45.45 | 51.95 |
| TraesCS5B01G312200.1 | Wheat | nucleus | 47.73 | 51.43 |
| HORVU5Hr1G080420.1 | Barley | nucleus, plastid | 54.17 | 50.35 |
| Zm00001d031728_P001 | Maize | nucleus, plastid | 43.18 | 50.22 |
| HORVU5Hr1G080380.1 | Barley | nucleus, plastid | 50.38 | 49.63 |
| TraesCS5D01G317900.1 | Wheat | nucleus | 45.08 | 49.58 |
| TraesCS5A01G310900.1 | Wheat | mitochondrion | 31.06 | 46.59 |
| Zm00001d002618_P001 | Maize | nucleus | 33.33 | 39.64 |
| AT1G63030.2 | Thale cress | nucleus | 26.89 | 39.23 |
| Solyc03g026280.2.1 | Tomato | nucleus | 31.06 | 39.05 |
| Solyc03g026270.1.1 | Tomato | nucleus | 30.3 | 39.02 |
| Zm00001d017592_P001 | Maize | nucleus | 34.09 | 38.96 |
| Bra019162.1-P | Field mustard | nucleus | 30.68 | 37.85 |
| CDY70584 | Canola | nucleus | 30.68 | 37.85 |
| PGSC0003DMT400037122 | Potato | nucleus | 31.06 | 37.79 |
| KRH35383 | Soybean | nucleus | 29.17 | 37.56 |
| Bra022770.1-P | Field mustard | nucleus | 30.3 | 37.38 |
| CDX84868 | Canola | nucleus | 30.3 | 37.38 |
| CDY66018 | Canola | nucleus | 30.3 | 37.38 |
| Bra027612.1-P | Field mustard | nucleus | 26.14 | 37.3 |
| CDY49205 | Canola | nucleus | 26.14 | 37.3 |
| CDX92710 | Canola | nucleus | 30.3 | 37.21 |
| AT4G25480.1 | Thale cress | nucleus | 30.3 | 37.04 |
| Zm00001d041981_P001 | Maize | nucleus | 34.09 | 36.73 |
| Zm00001d036003_P001 | Maize | nucleus | 32.2 | 36.64 |
| Solyc12g056430.1.1 | Tomato | nucleus | 28.03 | 36.45 |
| Solyc03g124110.1.1 | Tomato | nucleus | 30.3 | 36.36 |
| KRG91437 | Soybean | nucleus | 28.41 | 36.23 |
| Bra016763.1-P | Field mustard | nucleus | 27.27 | 35.64 |
| CDY71145 | Canola | nucleus | 27.27 | 35.64 |
| VIT_16s0100g00380.t01 | Wine grape | nucleus | 29.17 | 35.32 |
| CDY57075 | Canola | nucleus | 27.65 | 35.27 |
| AT4G25490.1 | Thale cress | nucleus | 28.41 | 35.21 |
| Bra019777.1-P | Field mustard | nucleus | 27.27 | 34.95 |
| CDY16016 | Canola | nucleus | 26.52 | 34.83 |
| AT5G51990.1 | Thale cress | nucleus | 29.55 | 34.82 |
| PGSC0003DMT400010876 | Potato | nucleus | 27.27 | 34.78 |
| CDY31270 | Canola | nucleus | 26.52 | 34.65 |
| CDY52356 | Canola | nucleus | 28.41 | 34.56 |
| Bra028290.1-P | Field mustard | nucleus | 28.79 | 34.55 |
| CDY00510 | Canola | nucleus | 28.79 | 34.55 |
| CDY52360 | Canola | nucleus | 28.79 | 34.39 |
| AT4G25470.1 | Thale cress | nucleus | 28.03 | 34.26 |
| Bra026963.1-P | Field mustard | nucleus | 26.52 | 34.15 |
| CDY26574 | Canola | nucleus | 26.52 | 34.15 |
| CDY31925 | Canola | nucleus | 28.41 | 34.09 |
| VIT_02s0025g04460.t01 | Wine grape | nucleus | 30.3 | 34.04 |
| AT1G12610.1 | Thale cress | nucleus | 26.89 | 33.97 |
| PGSC0003DMT400037120 | Potato | nucleus | 30.3 | 33.9 |
| CDY65499 | Canola | nucleus | 27.65 | 33.8 |
| PGSC0003DMT400037119 | Potato | mitochondrion | 15.53 | 33.61 |
| PGSC0003DMT400032622 | Potato | nucleus | 29.92 | 33.19 |
| KRH77483 | Soybean | nucleus | 28.03 | 32.74 |
| KRH09144 | Soybean | nucleus | 28.41 | 32.47 |
| PGSC0003DMT400032621 | Potato | nucleus | 29.92 | 32.38 |
| Solyc08g007820.1.1 | Tomato | nucleus | 29.92 | 32.38 |
| PGSC0003DMT400037118 | Potato | mitochondrion | 15.91 | 32.31 |
| PGSC0003DMT400037121 | Potato | nucleus | 31.06 | 31.78 |
| Solyc08g007830.1.1 | Tomato | nucleus | 27.27 | 31.44 |
| KRH57258 | Soybean | nucleus | 29.92 | 31.1 |
| KRH03987 | Soybean | nucleus | 28.79 | 29.8 |
| PGSC0003DMT400032623 | Potato | nucleus | 28.03 | 29.72 |
| Bra010461.1-P | Field mustard | nucleus | 28.41 | 29.07 |
| CDY52358 | Canola | nucleus | 20.08 | 28.04 |
| CDY66013 | Canola | nucleus | 20.08 | 27.75 |
| Bra010460.1-P | Field mustard | nucleus | 28.41 | 27.27 |
| PGSC0003DMT400006896 | Potato | cytosol | 13.64 | 26.87 |
| Bra010463.1-P | Field mustard | nucleus | 20.83 | 24.55 |
| KRH38616 | Soybean | plastid | 28.79 | 23.24 |
| PGSC0003DMT400090651 | Potato | nucleus | 27.65 | 22.19 |
Protein Annotations
| EntrezGene:103647602 | Gene3D:3.30.730.10 | MapMan:35.1 | UniProt:A0A1D6ETC2 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 |
| InterPro:IPR036955 | ProteinID:ONM22956.1 | PFAM:PF00847 | PFscan:PS51032 | PANTHER:PTHR31839 | PANTHER:PTHR31839:SF5 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0001BFBDB5 | EnsemblPlantsGene:Zm00001d006169 | EnsemblPlants:Zm00001d006169_P001 | EnsemblPlants:Zm00001d006169_T001 |
| SEG:seg | : | : | : | : | : |
Description
DRE-binding protein3CBF3-like protein%3B CRT/DRE binding factor%3B DREB-like protein
Coordinates
chr2:-:200397718..200398512
Molecular Weight (calculated)
27629.9 Da
IEP (calculated)
5.144
GRAVY (calculated)
-0.373
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTAGLVQHA TSSSSTSTSA SSSSSSSEQQ SKAAWPPSPA SSPQQPPKKR PAGRTKFRET RHPVFRGVRR RGAAGRWVCE VRVPGRRGAR LWLGTYLAAE
101: AAARAHDAAM LALQGRGAGR LNFPDSARLL AVPPPSALPG LDDARRAALE AVAEFQRRSG AADEATSGAS PPSSSPSLPD VSAAGSPAAA LEHVPVKADE
201: AVALDLDGDV FEPDWFGDMD LELDAYYASL AEGLLVEPPP PAAAWDHEDC CDSGAADVAL WSYY
101: AAARAHDAAM LALQGRGAGR LNFPDSARLL AVPPPSALPG LDDARRAALE AVAEFQRRSG AADEATSGAS PPSSSPSLPD VSAAGSPAAA LEHVPVKADE
201: AVALDLDGDV FEPDWFGDMD LELDAYYASL AEGLLVEPPP PAAAWDHEDC CDSGAADVAL WSYY
001: MNPFYSTFPD SFLSISDHRS PVSDSSECSP KLASSCPKKR AGRKKFRETR HPIYRGVRQR NSGKWVCEVR EPNKKSRIWL GTFPTVEMAA RAHDVAALAL
101: RGRSACLNFA DSAWRLRIPE TTCPKEIQKA ASEAAMAFQN ETTTEGSKTA AEAEEAAGEG VREGERRAEE QNGGVFYMDD EALLGMPNFF ENMAEGMLLP
201: PPEVGWNHND FDGVGDVSLW SFDE
101: RGRSACLNFA DSAWRLRIPE TTCPKEIQKA ASEAAMAFQN ETTTEGSKTA AEAEEAAGEG VREGERRAEE QNGGVFYMDD EALLGMPNFF ENMAEGMLLP
201: PPEVGWNHND FDGVGDVSLW SFDE
Arabidopsis Description
DREB1DC-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:B2BJ26]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.