Factsheet for Zm00001d034033_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002618_P001
Zm00001d006169_P001
Zm00001d006170_P001
Zm00001d014175_P004
Zm00001d017592_P001
Zm00001d021205_P001
Zm00001d021207_P001
Zm00001d021208_P001
Zm00001d031728_P001
Zm00001d036003_P001
Zm00001d041981_P001
Zm00001d052732_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G16420.1	Zm00001d014175_P004	AT3G54610.1	16603259
AT4G16420.1	Zm00001d014175_P004	AT3G54610.1	21798944
AT4G16420.1	Zm00001d002618_P001	AT4G25490.1	16603259
AT4G16420.1	Zm00001d006169_P001	AT4G25490.1	16603259
AT4G16420.1	Zm00001d006170_P001	AT4G25490.1	16603259
AT4G16420.1	Zm00001d017592_P001	AT4G25490.1	16603259
AT4G16420.1	Zm00001d021205_P001	AT4G25490.1	16603259
AT4G16420.1	Zm00001d021207_P001	AT4G25490.1	16603259
AT4G16420.1	Zm00001d021208_P001	AT4G25490.1	16603259
AT4G16420.1	Zm00001d031728_P001	AT4G25490.1	16603259
AT4G16420.1	Zm00001d036003_P001	AT4G25490.1	16603259
AT4G16420.1	Zm00001d041981_P001	AT4G25490.1	16603259
AT4G16420.1	Zm00001d052732_P001	AT4G25490.1	16603259

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90868	Sorghum	nucleus	96.28	96.28
Zm00001d013265_P003	Maize	nucleus	95.04	95.04
Os03t0750800-01	Rice	nucleus	89.91	89.59
TraesCS5A01G390300.2	Wheat	nucleus	88.67	88.2
TraesCS5B01G395200.1	Wheat	nucleus	84.07	87.96
TraesCS5D01G400100.2	Wheat	nucleus	88.32	87.85
HORVU5Hr1G095400.7	Barley	nucleus	87.96	87.5
GSMUA_Achr6P00130_001	Banana	nucleus	73.1	71.95
VIT_00s0194g00130.t01	Wine grape	nucleus	61.24	61.79
KRH36579	Soybean	nucleus	58.23	59.39
CDY34465	Canola	nucleus	15.75	58.55
KRH11557	Soybean	nucleus	57.17	58.3
CDX90526	Canola	nucleus	47.79	57.57
AT4G16420.1	Thale cress	nucleus	49.56	57.49
CDY09696	Canola	nucleus	47.61	57.36
Bra012721.1-P	Field mustard	nucleus	47.61	57.36
VIT_12s0057g00920.t01	Wine grape	nucleus	57.88	57.27
CDY42533	Canola	nucleus, plastid	49.2	57.2
Bra040578.1-P	Field mustard	nucleus	49.03	57.0
CDY69435	Canola	nucleus	48.85	56.79
Solyc07g047610.2.1	Tomato	nucleus	56.11	56.61
KRG90028	Soybean	nucleus	25.31	54.58
PGSC0003DMT400021785	Potato	nucleus	52.39	54.51
Solyc05g054200.2.1	Tomato	nucleus	52.39	54.51
KRH17664	Soybean	nucleus	53.45	52.8
KRG90027	Soybean	nucleus	7.61	51.19
CDY28021	Canola	nucleus	46.37	47.81
CDY35959	Canola	nucleus	46.55	47.56
AT3G07740.4	Thale cress	nucleus	46.37	47.21
Bra029673.1-P	Field mustard	nucleus	45.84	47.18

Protein Annotations

Gene3D:1.10.10.60	Gene3D:1.10.10.780	EntrezGene:100277032	MapMan:15.3.4.1.2	MapMan:15.5.2.2	Gene3D:3.30.60.90
EntrezGene:542031	InterPro:ADA2_plants	InterPro:Ada2/TADA2	UniProt:B4FW45	EMBL:BT041333	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003713	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0006357	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	GO:GO:0035065	GO:GO:0046872
GO:GO:1903508	InterPro:Homeobox-like_sf	InterPro:IPR000433	InterPro:IPR007526	InterPro:IPR017884	EMBL:KJ727498
ProteinID:ONM09336.1	PFAM:PF00249	PFAM:PF00569	PIRSF:PIRSF025024	ScanProsite:PS01357	PFscan:PS50135
PFscan:PS50934	PFscan:PS51293	PANTHER:PTHR12374	PANTHER:PTHR12374:SF39	InterPro:SANT/Myb	InterPro:SANT_dom
SMART:SM00291	SMART:SM00717	SUPFAM:SSF46689	SUPFAM:SSF57850	InterPro:SWIRM	UniParc:UPI00017B81BF
EnsemblPlantsGene:Zm00001d034033	EnsemblPlants:Zm00001d034033_P002	EnsemblPlants:Zm00001d034033_T002	InterPro:Znf_ZZ	SEG:seg	:

Description

histone acetyltransferase complex component102Transcriptional adapter ADA2b

Coordinates

chr1:-:281631722..281638487

Molecular Weight (calculated)

63451.7 Da

IEP (calculated)

7.865

GRAVY (calculated)

-0.674

Length

565 amino acids

Sequence
(BLAST)

001: MGRSRGVQNS GDDDTVHRSK RRRVASGGDA TDSVSAGIGG AGEGGGKKAL YHCNYCNKDI SGKIRIKCSK CPDFDLCVEC FSVGAEVTPH RSNHPYKVMD
101: NLSFPLICPD WNADEEILLL EGIEMYGLGN WLEVAEHVGT KSKLQCIDHY TTAYMNSPCY PLPDMSHVNG KNRKELLAMA KVQGESKKGT SLLPGELTPK
201: AESPFSPSRV KVEDALGEGL AGRSPSHIAV GANKKASNVG HIKDGSNVSK VEDGHVDRSV GVKKPRYSAD EGPSLTELSG YNAKRHEFDP EYDNDAEQAL
301: AEMEFKETDS ETDRELKLRV LRIYLSRLDE RKRRKEFILE RNLLFPNPLE KDLTNEDREV YHRYKVFMRF LSKEEHEALV RSVIEERKIR RRIQELQECR
401: SAGCRTLAEA KIHIEQKRKK EYELNAQKAK ESNHLIANTK LVQKMNRPMK IESDGNLDPK KGGVGLDSPK TTGLTSVKQW DDWDIVGLPG AELLSASEKL
501: LCCQNRLLPS HYLRMQEVLM QEIFKGSVLK KEDAHVLFKV DPTKVDSVYD MVTKKLGNHV ELPTV

Best Arabidopsis Sequence Match ( AT4G16420.1 )
(BLAST)

001: MGRSRGNFQN FEDPTQRTRK KKNAANVENF ESTSLVPGAE GGGKYNCDYC QKDITGKIRI KCAVCPDFDL CIECMSVGAE ITPHKCDHPY RVMGNLTFPL
101: ICPDWSADDE MLLLEGLEIY GLGNWAEVAE HVGTKSKEQC LEHYRNIYLN SPFFPLPDMS HVAGKNRKEL QAMAKGRIDD KKAEQNMKEE YPFSPPKVKV
201: EDTQKESFVD RSFGGKKPVS TSVNNSLVEL SNYNQKREEF DPEYDNDAEQ LLAEMEFKEN DTPEEHELKL RVLRIYSKRL DERKRRKEFI IERNLLYPNP
301: FEKDLSQEEK VQCRRLDVFM RFHSKEEHDE LLRNVVSEYR MVKRLKDLKE AQVAGCRSTA EAERYLGRKR KRENEEGMNR GKESGQFGQI AGEMGSRPPV
401: QASSSYVNDL DLIGFTESQL LSESEKRLCS EVKLVPPVYL QMQQVMSHEI FKGNVTKKSD AYSLFKIDPT KVDRVYDMLV KKGIAQL

Arabidopsis Description

ADA2BTranscriptional adapter ADA2b [Source:UniProtKB/Swiss-Prot;Acc:Q9ATB4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.