CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17664	Soybean	nucleus	66.41	30.42
KRH36579	Soybean	nucleus	55.34	26.17
KRH11557	Soybean	nucleus	54.58	25.81
Os03t0750800-01	Rice	nucleus	55.34	25.57
EER90868	Sorghum	nucleus	54.58	25.31
Zm00001d034033_P002	Maize	nucleus	54.58	25.31
TraesCS5A01G390300.2	Wheat	nucleus	54.58	25.18
Zm00001d013265_P003	Maize	nucleus	54.2	25.13
GSMUA_Achr6P00130_001	Banana	nucleus	54.96	25.09
TraesCS5D01G400100.2	Wheat	nucleus	54.2	25.0
HORVU5Hr1G095400.7	Barley	nucleus	53.82	24.82
TraesCS5B01G395200.1	Wheat	nucleus	46.56	22.59
KRG90027	Soybean	nucleus	2.29	7.14

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.3.4.1.2	MapMan:15.5.2.2	Gene3D:3.30.60.90	UniProt:A0A0R0E7P8	EMBL:ACUP02012494
InterPro:ADA2_plants	EnsemblPlantsGene:GLYMA_20G062300	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003682
GO:GO:0003700	GO:GO:0003713	GO:GO:0003824	GO:GO:0004402	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006338	GO:GO:0006357
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0016573	GO:GO:0016740	GO:GO:0019538	GO:GO:0035065	GO:GO:0035066
GO:GO:0046872	GO:GO:1903508	InterPro:Homeobox-like_sf	InterPro:IPR000433	InterPro:IPR017884	EnsemblPlants:KRG90028
ProteinID:KRG90028	ProteinID:KRG90028.1	PFAM:PF00249	PFAM:PF00569	ScanProsite:PS01357	PFscan:PS50135
PFscan:PS51293	PANTHER:PTHR12374	PANTHER:PTHR12374:SF39	InterPro:SANT/Myb	InterPro:SANT_dom	SMART:SM00291
SMART:SM00717	SUPFAM:SSF46689	SUPFAM:SSF57850	UniParc:UPI0006EDE096	InterPro:Znf_ZZ	SEG:seg

Description

hypothetical protein

Coordinates

chr20:-:19524180..19543450

Molecular Weight (calculated)

29289.6 Da

IEP (calculated)

6.837

GRAVY (calculated)

-0.526

Length

262 amino acids

Sequence
(BLAST)

001: MGRSRVALRS ADDDPNHRSK RKKAALNVEN SETLPTGQGV TTSKVSLYHC NYCNKDISGK IRIKCAVCQD FDLCLECFSV GAEVTPHKSN HPYRIMDNLS
101: FPLICTDWNA DEELLLLEGI ETYGFGNWNE VAEYVGTKTK SQCIDHYNAV YMNSPCFPLP DLSHVMGKNK VELCAMAKGH EAKKEFSLTA ELTLKEEALF
201: TDRINYEESK NAEINNQTMS RLTSACGKAY PSTIKKASNV IQNNGGVKVE GTWDGATDWR RI

Best Arabidopsis Sequence Match ( AT3G07740.1 )
(BLAST)

001: MGRSKLASRP AEEDLNPGKS KRKKISLGPE NAAASISTGI EAGNERKPGL YCCNYCDKDL SGLVRFKCAV CMDFDLCVEC FSVGVELNRH KNSHPYRVMD
101: NLSFSLVTSD WNADEEILLL EAIATYGFGN WKEVADHVGS KTTTECIKHF NSAYMQSPCF PLPDLSHTIG KSKDELLAMS KDSAVKTEIP AFVRLSPKEE
201: LPVSAEIKHE ASGKVNEIDP PLSALAGVKK KGNVPQAKDI IKLEAAKQQS DRSVGEKKLR LPGEKVPLVT ELYGYNLKRE EFEIEHDNDA EQLLADMEFK
301: DSDTDAEREQ KLQVLRIYSK RLDERKRRKE FVLERNLLYP DQYEMSLSAE ERKIYKSCKV FARFQSKEEH KELIKKVIEE HQILRRIEDL QEARTAGCRT
401: TSDANRFIEE KRKKEAEESM LLRLNHGAPG SIAGKTLKSP RGLPRNLHPF GSDSLPKVTP PRIYSGLDTW DVDGLLGADL LSETEKKMCN ETRILPVHYL
501: KMLDILTREI KKGQIKKKSD AYSFFKVEPS KVDRVYDMLV HKGIGDST

Arabidopsis Description

ADA2ATranscriptional adapter [Source:UniProtKB/TrEMBL;Acc:F4JFM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.