CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90027	Soybean	nucleus	11.36	77.38
KRG90028	Soybean	nucleus	30.42	66.41
VIT_12s0057g00920.t01	Wine grape	nucleus	59.97	60.07
Solyc07g047610.2.1	Tomato	nucleus	56.12	57.32
CDY28021	Canola	nucleus	52.45	54.74
Bra029673.1-P	Field mustard	nucleus	52.1	54.28
KRH11557	Soybean	nucleus	52.45	54.15
KRH36579	Soybean	nucleus	52.45	54.15
CDY35959	Canola	nucleus	52.27	54.07
Os03t0750800-01	Rice	nucleus	53.32	53.79
EER90868	Sorghum	nucleus	52.97	53.63
TraesCS5D01G400100.2	Wheat	nucleus	53.15	53.52
Zm00001d034033_P002	Maize	nucleus	52.8	53.45
TraesCS5A01G390300.2	Wheat	nucleus	52.97	53.35
Zm00001d013265_P003	Maize	nucleus	52.62	53.27
HORVU5Hr1G095400.7	Barley	nucleus	52.62	52.99
AT3G07740.4	Thale cress	nucleus	51.4	52.97
GSMUA_Achr6P00130_001	Banana	nucleus	52.8	52.61
TraesCS5B01G395200.1	Wheat	nucleus	48.95	51.85

Protein Annotations

Gene3D:1.10.10.60	Gene3D:1.10.10.780	EntrezGene:100779424	MapMan:15.3.4.1.2	MapMan:15.5.2.2	Gene3D:3.30.60.90
UniProt:A0A0R0GH09	EMBL:ACUP02007826	InterPro:ADA2_plants	InterPro:Ada2/TADA2	EnsemblPlantsGene:GLYMA_13G006200	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003713	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0006357	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	GO:GO:0035065	GO:GO:0046872	GO:GO:1903508
InterPro:Homeobox-like_sf	InterPro:IPR000433	InterPro:IPR007526	InterPro:IPR017884	EnsemblPlants:KRH17664	ProteinID:KRH17664
ProteinID:KRH17664.1	PFAM:PF00249	PFAM:PF00569	PIRSF:PIRSF025024	ScanProsite:PS01357	PFscan:PS50135
PFscan:PS50934	PFscan:PS51293	PANTHER:PTHR12374	PANTHER:PTHR12374:SF39	InterPro:SANT/Myb	InterPro:SANT_dom
SMART:SM00291	SMART:SM00717	SUPFAM:SSF46689	SUPFAM:SSF57850	InterPro:SWIRM	UniParc:UPI0003DE8AEF
InterPro:Znf_ZZ	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:1844263..1860915

Molecular Weight (calculated)

65065.3 Da

IEP (calculated)

6.186

GRAVY (calculated)

-0.608

Length

572 amino acids

Sequence
(BLAST)

001: MPRNQHISWL DTLVLHGEKL FHNKHCSQRS KRKRAALNVE NSETLPTGQG VTNSKVSPYH CNYCNKDISG KIRIKCAVCQ DFDLCIECFS VGAEVTPHKS
101: NHPYRIMDNL SFPLICPDWN ADEEMLLLEG IEMYGFGNWN EVAEYIGTKS KSQCIDHYNA VYMNSPCFPL PDLSHVMGKS KEELFAMMKG HEAKKEFSLT
201: TELTLKEEPP FVDGINYEES KKEEINDQTM SRLTSACGKA YSSTVKKASS VIQNNDGVKV EVESHADRSI GEKKLKLSGE DRPSMTNLSG YSFKREEFDV
301: EYDNDAEQVL ADMEFKDTDT EAEYEMKLQV LHIYSKRLDE RKRRKNFILE RDLLYPDPFE KSLLPEELQI CQRYKVFMRF HSKEEHQDLL KNIIEEHRLV
401: KRIQDLQEAR IAGCVTAADA YRFIEQKRTK EAEPSACKES GQIGTSAKTL QRPNSLKGEV DSSPQGLQKG TAALFAGAKD SPPAIQVFTR SLEEWDISGF
501: AGAELLSESE KKLCDEIRIL PSHYLNMLQT LSLEISKGSV TKKSDAHALF KVEPSKVDRV YDMLVTKGVV QT

Best Arabidopsis Sequence Match ( AT3G07740.1 )
(BLAST)

001: MGRSKLASRP AEEDLNPGKS KRKKISLGPE NAAASISTGI EAGNERKPGL YCCNYCDKDL SGLVRFKCAV CMDFDLCVEC FSVGVELNRH KNSHPYRVMD
101: NLSFSLVTSD WNADEEILLL EAIATYGFGN WKEVADHVGS KTTTECIKHF NSAYMQSPCF PLPDLSHTIG KSKDELLAMS KDSAVKTEIP AFVRLSPKEE
201: LPVSAEIKHE ASGKVNEIDP PLSALAGVKK KGNVPQAKDI IKLEAAKQQS DRSVGEKKLR LPGEKVPLVT ELYGYNLKRE EFEIEHDNDA EQLLADMEFK
301: DSDTDAEREQ KLQVLRIYSK RLDERKRRKE FVLERNLLYP DQYEMSLSAE ERKIYKSCKV FARFQSKEEH KELIKKVIEE HQILRRIEDL QEARTAGCRT
401: TSDANRFIEE KRKKEAEESM LLRLNHGAPG SIAGKTLKSP RGLPRNLHPF GSDSLPKVTP PRIYSGLDTW DVDGLLGADL LSETEKKMCN ETRILPVHYL
501: KMLDILTREI KKGQIKKKSD AYSFFKVEPS KVDRVYDMLV HKGIGDST

Arabidopsis Description

ADA2ATranscriptional adapter [Source:UniProtKB/TrEMBL;Acc:F4JFM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.