Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G390300.2 | Wheat | nucleus | 98.7 | 93.84 |
| TraesCS5D01G400100.2 | Wheat | nucleus | 98.52 | 93.66 |
| HORVU5Hr1G095400.7 | Barley | nucleus | 98.15 | 93.31 |
| EER90868 | Sorghum | nucleus | 88.7 | 84.78 |
| Os03t0750800-01 | Rice | nucleus | 88.7 | 84.48 |
| Zm00001d034033_P002 | Maize | nucleus | 87.96 | 84.07 |
| Zm00001d013265_P003 | Maize | nucleus | 87.04 | 83.19 |
| GSMUA_Achr6P00130_001 | Banana | nucleus | 71.85 | 67.6 |
| VIT_00s0194g00130.t01 | Wine grape | nucleus | 59.07 | 56.96 |
| KRH36579 | Soybean | nucleus | 57.22 | 55.78 |
| KRH11557 | Soybean | nucleus | 56.48 | 55.05 |
| VIT_12s0057g00920.t01 | Wine grape | nucleus | 55.74 | 52.71 |
| AT4G16420.1 | Thale cress | nucleus | 47.41 | 52.57 |
| CDY42533 | Canola | nucleus, plastid | 47.04 | 52.26 |
| CDX90526 | Canola | nucleus | 45.37 | 52.24 |
| Solyc07g047610.2.1 | Tomato | nucleus | 54.07 | 52.14 |
| Bra040578.1-P | Field mustard | nucleus | 46.85 | 52.06 |
| Bra012721.1-P | Field mustard | nucleus | 45.19 | 52.03 |
| CDY09696 | Canola | nucleus | 45.19 | 52.03 |
| CDY69435 | Canola | nucleus | 46.67 | 51.85 |
| Solyc05g054200.2.1 | Tomato | nucleus | 51.11 | 50.83 |
| PGSC0003DMT400021785 | Potato | nucleus | 50.56 | 50.28 |
| KRH17664 | Soybean | nucleus | 51.85 | 48.95 |
| KRG90027 | Soybean | nucleus | 7.59 | 48.81 |
| KRG90028 | Soybean | nucleus | 22.59 | 46.56 |
| CDY35959 | Canola | nucleus | 45.93 | 44.85 |
| CDY34465 | Canola | nucleus | 12.59 | 44.74 |
| CDY28021 | Canola | nucleus | 45.37 | 44.71 |
| Bra029673.1-P | Field mustard | nucleus | 45.37 | 44.63 |
| AT3G07740.4 | Thale cress | nucleus | 44.63 | 43.42 |
Protein Annotations
| Gene3D:1.10.10.60 | Gene3D:1.10.10.780 | MapMan:15.3.4.1.2 | MapMan:15.5.2.2 | InterPro:ADA2_plants | InterPro:Ada2/TADA2 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003713 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006357 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0035065 | InterPro:Homeobox-like_sf | InterPro:IPR007526 |
| InterPro:IPR017884 | PFAM:PF00249 | PIRSF:PIRSF025024 | PFscan:PS50934 | PFscan:PS51293 | PANTHER:PTHR12374 |
| PANTHER:PTHR12374:SF39 | InterPro:SANT/Myb | InterPro:SANT_dom | SMART:SM00717 | SUPFAM:SSF46689 | InterPro:SWIRM |
| EnsemblPlantsGene:TraesCS5B01G395200 | EnsemblPlants:TraesCS5B01G395200.1 | TIGR:cd00167 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5B:-:572591446..572595657
Molecular Weight (calculated)
60715.0 Da
IEP (calculated)
8.107
GRAVY (calculated)
-0.803
Length
540 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSRGVPNS GDDDTNHRSK RRRVASTGDA SDSLSAACGG AGDGKKALYH CNYCNKVTPH RSNHPYRVMD NLSFPLICPD WNADEEILLL EGIEMYGLGN
101: WAEVAEHVGT KSKAQCIEHY TTAYMNSPCY PLPDMSHVNG KNRKELLAMA KVQGESKKGI PLLSGDLTPK AESPFSPSRV KMEDALGEGP ASRSPSHIPG
201: GANKKASTVG HFKDSANLSK VEDGHMDRSI GVKKPRYSAD EGPSLTELSG YNAKRHEFDP EYDNDAEQAL AEMEFKETDS ETDRELKLRV LRIYLSRLDE
301: RKRRKEFILE RNLLYPNPLE KDLTNEDKEV YHRYKVFMRF LSKEEHEALV RSVIEERKIR RRIQELQECR SAGCRTLAEA KIHIEQKRRK EYEANALKAK
401: ESGQLISNSK SGHKTNRPMK VETDGSLDLK KGSAILDAGG RDSPKSTGPT SAKQWDDWDI VGLPGAELLS ASEKLLCCQN RLLPSHYLRM QEVLMQEMFK
501: GNVIKKEDAR VLFKVDPTKV DTVYDMVTKK LGNNEEAPMV
101: WAEVAEHVGT KSKAQCIEHY TTAYMNSPCY PLPDMSHVNG KNRKELLAMA KVQGESKKGI PLLSGDLTPK AESPFSPSRV KMEDALGEGP ASRSPSHIPG
201: GANKKASTVG HFKDSANLSK VEDGHMDRSI GVKKPRYSAD EGPSLTELSG YNAKRHEFDP EYDNDAEQAL AEMEFKETDS ETDRELKLRV LRIYLSRLDE
301: RKRRKEFILE RNLLYPNPLE KDLTNEDKEV YHRYKVFMRF LSKEEHEALV RSVIEERKIR RRIQELQECR SAGCRTLAEA KIHIEQKRRK EYEANALKAK
401: ESGQLISNSK SGHKTNRPMK VETDGSLDLK KGSAILDAGG RDSPKSTGPT SAKQWDDWDI VGLPGAELLS ASEKLLCCQN RLLPSHYLRM QEVLMQEMFK
501: GNVIKKEDAR VLFKVDPTKV DTVYDMVTKK LGNNEEAPMV
001: MGRSRGNFQN FEDPTQRTRK KKNAANVENF ESTSLVPGAE GGGKYNCDYC QKDITGKIRI KCAVCPDFDL CIECMSVGAE ITPHKCDHPY RVMGNLTFPL
101: ICPDWSADDE MLLLEGLEIY GLGNWAEVAE HVGTKSKEQC LEHYRNIYLN SPFFPLPDMS HVAGKNRKEL QAMAKGRIDD KKAEQNMKEE YPFSPPKVKV
201: EDTQKESFVD RSFGGKKPVS TSVNNSLVEL SNYNQKREEF DPEYDNDAEQ LLAEMEFKEN DTPEEHELKL RVLRIYSKRL DERKRRKEFI IERNLLYPNP
301: FEKDLSQEEK VQCRRLDVFM RFHSKEEHDE LLRNVVSEYR MVKRLKDLKE AQVAGCRSTA EAERYLGRKR KRENEEGMNR GKESGQFGQI AGEMGSRPPV
401: QASSSYVNDL DLIGFTESQL LSESEKRLCS EVKLVPPVYL QMQQVMSHEI FKGNVTKKSD AYSLFKIDPT KVDRVYDMLV KKGIAQL
101: ICPDWSADDE MLLLEGLEIY GLGNWAEVAE HVGTKSKEQC LEHYRNIYLN SPFFPLPDMS HVAGKNRKEL QAMAKGRIDD KKAEQNMKEE YPFSPPKVKV
201: EDTQKESFVD RSFGGKKPVS TSVNNSLVEL SNYNQKREEF DPEYDNDAEQ LLAEMEFKEN DTPEEHELKL RVLRIYSKRL DERKRRKEFI IERNLLYPNP
301: FEKDLSQEEK VQCRRLDVFM RFHSKEEHDE LLRNVVSEYR MVKRLKDLKE AQVAGCRSTA EAERYLGRKR KRENEEGMNR GKESGQFGQI AGEMGSRPPV
401: QASSSYVNDL DLIGFTESQL LSESEKRLCS EVKLVPPVYL QMQQVMSHEI FKGNVTKKSD AYSLFKIDPT KVDRVYDMLV KKGIAQL
Arabidopsis Description
ADA2BTranscriptional adapter ADA2b [Source:UniProtKB/Swiss-Prot;Acc:Q9ATB4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.