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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G311000.1 Wheat nucleus 97.73 97.73
TraesCS5B01G311700.1 Wheat nucleus 97.27 97.27
HORVU5Hr1G080310.1 Barley nucleus 89.55 89.14
TraesCS5D01G317500.1 Wheat nucleus 85.0 82.74
TraesCS5D01G317300.1 Wheat nucleus 86.36 82.61
TraesCS5D01G317200.1 Wheat nucleus 59.55 61.5
TraesCS5D01G317700.1 Wheat nucleus 57.73 59.91
TraesCS5D01G317800.1 Wheat nucleus 53.64 58.42
TraesCS5D01G318300.1 Wheat nucleus 55.0 56.54
TraesCS5D01G317600.1 Wheat nucleus, plastid 52.27 51.57
TraesCS5D01G317400.1 Wheat nucleus 60.45 48.36
TraesCS5D01G317100.1 Wheat nucleus, plastid 59.09 48.33
TraesCS6D01G238200.1 Wheat nucleus 42.27 42.86
VIT_16s0100g00380.t01 Wine grape nucleus 42.27 42.66
AT1G63030.2 Thale cress nucleus 35.0 42.54
TraesCS5D01G318600.1 Wheat nucleus 44.09 41.63
CDY49205 Canola nucleus 35.0 41.62
Bra027612.1-P Field mustard nucleus 35.0 41.62
TraesCS5D01G318200.1 Wheat nucleus, plastid 43.64 41.56
KRG91437 Soybean nucleus 39.09 41.55
KRH35383 Soybean nucleus 38.18 40.98
Solyc03g026270.1.1 Tomato nucleus 37.73 40.49
CDX92710 Canola nucleus 39.55 40.47
CDY16016 Canola nucleus 36.82 40.3
TraesCS2D01G397000.1 Wheat nucleus 39.55 40.09
TraesCS2D01G015200.1 Wheat nucleus 34.55 39.79
TraesCS5D01G318400.1 Wheat nucleus 43.18 39.75
TraesCS5D01G318100.1 Wheat nucleus, plastid 42.27 39.74
Bra019162.1-P Field mustard nucleus 38.64 39.72
CDY70584 Canola nucleus 38.64 39.72
Bra016763.1-P Field mustard nucleus 36.36 39.6
CDY71145 Canola nucleus 36.36 39.6
Bra026963.1-P Field mustard nucleus 36.82 39.51
CDY26574 Canola nucleus 36.82 39.51
TraesCS6D01G173500.1 Wheat plastid 43.64 39.51
TraesCS5D01G318900.1 Wheat nucleus 42.73 39.5
AT4G25490.1 Thale cress nucleus 37.73 38.97
TraesCS6D01G366100.1 Wheat nucleus 43.18 38.93
AT4G25480.1 Thale cress nucleus 38.18 38.89
Bra019777.1-P Field mustard nucleus 36.36 38.84
Bra022770.1-P Field mustard nucleus 37.73 38.78
CDX84868 Canola nucleus 37.73 38.78
CDY66018 Canola nucleus 37.73 38.78
TraesCS6D01G365800.1 Wheat nucleus 43.18 38.78
PGSC0003DMT400037122 Potato nucleus 38.18 38.71
CDY57075 Canola nucleus 36.36 38.65
CDY31270 Canola nucleus 35.45 38.61
Solyc03g026280.2.1 Tomato nucleus 36.82 38.57
AT4G25470.1 Thale cress nucleus 37.73 38.43
VIT_02s0025g04460.t01 Wine grape nucleus 40.91 38.3
CDY52356 Canola nucleus 37.73 38.25
CDY00510 Canola nucleus 38.18 38.18
Bra028290.1-P Field mustard nucleus 38.18 38.18
PGSC0003DMT400010876 Potato nucleus 35.91 38.16
TraesCS5D01G318800.1 Wheat nucleus, plastid 41.36 37.92
CDY52360 Canola nucleus 37.73 37.56
CDY65499 Canola nucleus 36.82 37.5
Solyc12g056430.1.1 Tomato nucleus 34.55 37.44
AT1G12610.1 Thale cress nucleus 35.45 37.32
CDY31925 Canola nucleus 37.27 37.27
TraesCS5D01G317900.1 Wheat nucleus 40.45 37.08
PGSC0003DMT400037119 Potato mitochondrion 20.45 36.89
KRH77483 Soybean nucleus 37.73 36.73
OQU89795 Sorghum mitochondrion, nucleus 55.91 36.72
AT5G51990.1 Thale cress nucleus 37.27 36.61
Solyc03g124110.1.1 Tomato nucleus 36.36 36.36
TraesCS5D01G318500.1 Wheat nucleus 40.0 36.21
TraesCS7D01G052500.1 Wheat nucleus 36.82 35.68
TraesCS7D01G052400.1 Wheat nucleus 35.45 35.62
TraesCS7D01G052600.1 Wheat nucleus 35.91 35.27
PGSC0003DMT400032622 Potato nucleus 37.73 34.87
PGSC0003DMT400037118 Potato mitochondrion 20.45 34.62
PGSC0003DMT400037120 Potato nucleus 36.82 34.32
KRH09144 Soybean nucleus 35.91 34.2
Solyc08g007830.1.1 Tomato nucleus 35.0 33.62
Solyc08g007820.1.1 Tomato nucleus 36.82 33.2
CDY66013 Canola nucleus 28.64 32.98
CDY52358 Canola nucleus 28.18 32.8
PGSC0003DMT400032621 Potato nucleus 36.36 32.79
KRH57258 Soybean nucleus 37.73 32.68
Bra010461.1-P Field mustard nucleus 38.18 32.56
KRH03987 Soybean nucleus 37.27 32.16
PGSC0003DMT400037121 Potato nucleus 37.27 31.78
Bra010460.1-P Field mustard nucleus 37.73 30.18
PGSC0003DMT400032623 Potato nucleus 34.09 30.12
Bra010463.1-P Field mustard nucleus 29.09 28.57
PGSC0003DMT400006896 Potato cytosol 16.36 26.87
PGSC0003DMT400090651 Potato nucleus 38.18 25.53
KRH38616 Soybean plastid 36.36 24.46
Protein Annotations
Gene3D:3.30.730.10MapMan:35.1InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfInterPro:DNA-bd_dom_sfGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0006139GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR001471InterPro:IPR036955
PFAM:PF00847PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31839PANTHER:PTHR31839:SF9SMART:SM00380
SUPFAM:SSF54171EnsemblPlantsGene:TraesCS5D01G318000EnsemblPlants:TraesCS5D01G318000.1TIGR:cd00018SEG:seg:
Description
No Description!
Coordinates
chr5D:-:410873558..410874220
Molecular Weight (calculated)
24471.4 Da
IEP (calculated)
4.743
GRAVY (calculated)
-0.479
Length
220 amino acids
Sequence
(BLAST)
001: MDTVAAWPQF EGQEYMTVWP EEQEYRTVWS EPPKRRAGRI KLQETRHPVY RGVRRRGRVG QWVCELRVPA SRGYSRLWLG TFATAEMAAR AHDSAALALS
101: GHDACLNFAD SAWRMMPVHA TGSFRFAPAQ EIKDAVAVAL EAFQEQHPAD ASTTEASAPS ITSSDLSGLD DELLIDGMDA GSYYASLAQG MLMEPPAAGA
201: WREDREHDDG FDTPTSLWSY
Best Arabidopsis Sequence Match ( AT4G25480.1 )
(BLAST)
001: MNSFSAFSEM FGSDYESSVS SGGDYIPTLA SSCPKKPAGR KKFRETRHPI YRGVRRRNSG KWVCEVREPN KKTRIWLGTF QTAEMAARAH DVAALALRGR
101: SACLNFADSA WRLRIPESTC AKDIQKAAAE AALAFQDEMC DATTDHGFDM EETLVEAIYT AEQSENAFYM HDEAMFEMPS LLANMAEGML LPLPSVQWNH
201: NHEVDGDDDD VSLWSY
Arabidopsis Description
DREB1ADehydration-responsive element-binding protein 1A [Source:UniProtKB/Swiss-Prot;Acc:Q9M0L0]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.