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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • cytosol 1
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400032621 Potato nucleus 91.8 91.8
PGSC0003DMT400032622 Potato nucleus 88.52 90.76
Solyc08g007830.1.1 Tomato nucleus 63.11 67.25
Solyc12g056430.1.1 Tomato nucleus 50.41 60.59
Solyc03g026270.1.1 Tomato nucleus 41.39 49.27
GSMUA_Achr11P... Banana nucleus 40.98 48.08
GSMUA_Achr6P13340_001 Banana nucleus 37.3 47.64
VIT_02s0025g04460.t01 Wine grape nucleus 45.08 46.81
Solyc03g026280.2.1 Tomato nucleus 39.75 46.19
HORVU5Hr1G041600.1 Barley nucleus 25.0 45.52
GSMUA_Achr8P11980_001 Banana nucleus 38.93 45.02
Solyc03g124110.1.1 Tomato nucleus 40.57 45.0
Os04t0572400-00 Rice nucleus 40.16 44.75
HORVU0Hr1G016540.1 Barley nucleus 39.75 44.7
TraesCS6A01G256900.1 Wheat nucleus 39.75 44.7
TraesCS6B01G268100.1 Wheat nucleus 39.75 44.7
TraesCS6D01G238200.1 Wheat nucleus 39.34 44.24
TraesCS2A01G399500.1 Wheat nucleus, plastid 39.34 44.04
TraesCS2D01G397000.1 Wheat nucleus 38.93 43.78
Zm00001d002618_P001 Maize nucleus 39.75 43.69
Os02t0677300-02 Rice nucleus 39.75 43.3
GSMUA_Achr8P16070_001 Banana nucleus, plastid 33.61 42.49
EES11288 Sorghum nucleus 38.93 41.85
Os01t0968800-00 Rice nucleus 37.3 41.55
Solyc01g009440.1.1 Tomato nucleus 35.25 40.95
GSMUA_Achr2P20280_001 Banana nucleus 33.61 40.8
GSMUA_Achr7P05900_001 Banana nucleus 34.43 40.78
Zm00001d017592_P001 Maize nucleus 38.52 40.69
TraesCS2B01G002700.1 Wheat nucleus, plastid 31.56 40.53
TraesCS2B01G417500.1 Wheat nucleus 35.25 40.38
TraesCS2D01G015200.1 Wheat nucleus 31.56 40.31
GSMUA_Achr10P... Banana nucleus 36.89 39.82
HORVU6Hr1G065580.4 Barley nucleus, plastid 36.48 39.56
TraesCS5A01G311700.1 Wheat nucleus 36.89 38.63
TraesCS7A01G057800.1 Wheat nucleus, plastid 33.2 38.57
TraesCS5D01G318600.1 Wheat nucleus 36.48 38.2
EES02136 Sorghum nucleus 37.7 38.02
TraesCS4A01G433300.1 Wheat nucleus 33.61 37.96
Os06t0127100-01 Rice nucleus 33.2 37.85
HORVU5Hr1G080340.1 Barley nucleus, plastid 36.07 37.77
TraesCS5B01G312300.1 Wheat nucleus 35.66 37.34
TraesCS5D01G318200.1 Wheat nucleus, plastid 35.25 37.23
TraesCS5B01G311900.1 Wheat plastid 35.66 37.18
TraesCS5D01G318100.1 Wheat nucleus, plastid 35.66 37.18
Zm00001d041981_P001 Maize nucleus 37.3 37.14
TraesCS5D01G318400.1 Wheat nucleus 36.07 36.82
TraesCS5D01G318000.1 Wheat nucleus 33.2 36.82
TraesCS7D01G052600.1 Wheat nucleus 33.61 36.61
TraesCS4A01G433200.1 Wheat nucleus 34.02 36.4
TraesCS5A01G311000.1 Wheat nucleus 32.79 36.36
TraesCS5B01G311700.1 Wheat nucleus 32.79 36.36
TraesCS5A01G311100.1 Wheat nucleus 34.84 36.32
Zm00001d036003_P001 Maize nucleus 34.43 36.21
TraesCS7D01G052400.1 Wheat nucleus 32.38 36.07
TraesCS5A01G311500.1 Wheat nucleus, plastid 34.84 35.71
TraesCS5B01G311200.1 Wheat nucleus 33.2 35.68
TraesCS7D01G052500.1 Wheat nucleus 33.2 35.68
TraesCS5A01G310400.1 Wheat nucleus 33.61 35.65
TraesCS5D01G317300.1 Wheat nucleus 33.61 35.65
TraesCS5B01G312100.1 Wheat nucleus, plastid 34.84 35.56
TraesCS7A01G057700.1 Wheat nucleus 32.79 35.56
TraesCS6A01G186400.1 Wheat plastid 34.43 35.44
TraesCS5B01G310900.1 Wheat nucleus 25.41 35.43
HORVU5Hr1G080310.1 Barley nucleus 31.97 35.29
HORVU5Hr1G080220.2 Barley nucleus 32.38 35.27
TraesCS6B01G218000.1 Wheat plastid 35.25 35.25
TraesCS5A01G310600.1 Wheat nucleus 32.38 35.11
HORVU5Hr1G080440.2 Barley nucleus, plastid 35.25 35.1
TraesCS6A01G381200.1 Wheat plastid 35.25 35.1
TraesCS5D01G318800.1 Wheat nucleus, plastid 34.43 35.0
TraesCS5A01G310200.1 Wheat nucleus 30.33 34.91
TraesCS5A01G311900.1 Wheat nucleus 34.02 34.73
HORVU7Hr1G010510.2 Barley nucleus 29.1 34.63
TraesCS5B01G312800.1 Wheat plastid 34.02 34.58
Zm00001d052732_P001 Maize plastid 31.56 34.53
TraesCS5D01G317500.1 Wheat nucleus 31.97 34.51
TraesCS5B01G311500.1 Wheat nucleus 29.92 34.43
HORVU5Hr1G080400.1 Barley nucleus, plastid 14.75 34.29
TraesCS6D01G365800.1 Wheat nucleus 34.43 34.29
TraesCS5D01G317200.1 Wheat nucleus 29.92 34.27
TraesCS5B01G312700.1 Wheat nucleus 34.02 34.16
TraesCS6D01G173500.1 Wheat plastid 34.02 34.16
TraesCS6A01G381000.1 Wheat nucleus 34.43 34.15
TraesCS5A01G311800.1 Wheat plastid 34.02 34.02
TraesCS6D01G366100.1 Wheat nucleus 34.02 34.02
TraesCS5D01G317700.1 Wheat nucleus 29.51 33.96
TraesCS6B01G420100.1 Wheat nucleus 34.02 33.88
TraesCS5B01G312000.1 Wheat nucleus 29.51 33.64
TraesCS5D01G318300.1 Wheat nucleus 29.51 33.64
HORVU5Hr1G080430.1 Barley nucleus 33.2 33.61
TraesCS5B01G312900.1 Wheat nucleus 33.61 33.61
TraesCS5A01G311300.1 Wheat nucleus 29.1 33.49
TraesCS1B01G335100.1 Wheat nucleus 30.33 33.33
Zm00001d021205_P001 Maize plastid 33.61 33.33
TraesCS5B01G311600.1 Wheat nucleus 27.46 33.17
Os09t0522100-00 Rice nucleus 33.2 32.93
HORVU5Hr1G080300.1 Barley nucleus 30.33 32.89
TraesCS5A01G310700.1 Wheat nucleus 29.92 32.88
TraesCS5B01G311400.1 Wheat nucleus 29.92 32.88
TraesCS5A01G310000.1 Wheat plastid 33.2 32.79
HORVU5Hr1G080350.1 Barley nucleus 28.69 32.71
TraesCS5D01G317800.1 Wheat nucleus 27.05 32.67
Zm00001d031728_P001 Maize nucleus, plastid 30.33 32.6
HORVU6Hr1G089320.1 Barley nucleus 29.92 32.59
Zm00001d021208_P001 Maize plastid 30.74 32.47
Zm00001d006170_P001 Maize nucleus 30.33 32.17
TraesCS5D01G318500.1 Wheat nucleus 31.97 32.1
TraesCS5D01G317900.1 Wheat nucleus 31.56 32.08
TraesCS5A01G311600.1 Wheat nucleus 31.97 31.84
TraesCS5B01G312200.1 Wheat nucleus 31.97 31.84
EER87753 Sorghum nucleus 32.38 31.73
EER99213 Sorghum nucleus 30.33 31.49
Os09t0522200-01 Rice nucleus 30.33 31.09
Zm00001d021207_P001 Maize nucleus 30.33 31.09
TraesCS5A01G310800.1 Wheat nucleus 27.46 31.02
HORVU5Hr1G080380.1 Barley nucleus, plastid 33.61 30.6
TraesCS5B01G313000.1 Wheat nucleus 29.51 30.51
TraesCS5D01G318900.1 Wheat nucleus 29.51 30.25
EER99212 Sorghum nucleus, plastid 29.51 30.0
Zm00001d006169_P001 Maize plastid 32.38 29.92
EER99214 Sorghum plastid 29.92 29.92
EES14131 Sorghum nucleus, plastid 29.1 29.58
HORVU5Hr1G080420.1 Barley nucleus, plastid 34.43 29.58
EER99211 Sorghum plastid 33.2 29.45
TraesCS5A01G312000.1 Wheat plastid 29.1 29.34
OQU85641 Sorghum nucleus 39.34 28.83
TraesCS5A01G310100.1 Wheat nucleus 30.33 27.51
TraesCS5B01G310800.1 Wheat nucleus 29.92 27.14
TraesCS5D01G317100.1 Wheat nucleus, plastid 29.51 26.77
GSMUA_Achr4P19660_001 Banana mitochondrion, nucleus 34.84 26.73
TraesCS5A01G310900.1 Wheat mitochondrion 18.85 26.14
TraesCS5A01G310500.1 Wheat nucleus, plastid 28.69 25.45
TraesCS5D01G317400.1 Wheat nucleus 28.69 25.45
HORVU5Hr1G080450.1 Barley nucleus, plastid 30.74 24.92
HORVU5Hr1G080230.1 Barley nucleus 29.51 24.74
TraesCS5D01G317600.1 Wheat nucleus, plastid 22.54 24.66
OQU89795 Sorghum mitochondrion, nucleus 32.38 23.58
TraesCS5B01G311300.1 Wheat nucleus 27.87 23.45
Os06t0165600-01 Rice nucleus, plastid 21.72 20.95
Protein Annotations
MapMan:15.5.7.2Gene3D:3.30.730.10InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfInterPro:DNA-bd_dom_sfGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR001471InterPro:IPR036955UniProt:K4CIR9
PFAM:PF00847PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31839PANTHER:PTHR31839:SF0SMART:SM00380
SUPFAM:SSF54171EnsemblPlantsGene:Solyc08g007820.1EnsemblPlants:Solyc08g007820.1.1UniParc:UPI000276C856SEG:seg:
Description
No Description!
Coordinates
chr8:-:2326801..2327535
Molecular Weight (calculated)
27409.1 Da
IEP (calculated)
4.646
GRAVY (calculated)
-0.583
Length
244 amino acids
Sequence
(BLAST)
001: MNNDSSLYSS DINPLSATTP SNEEGILLLA SSQPKKRAGR KKFKETRHPV YRGVRRRNNN KWVCELREPS QQKRIWLGTY STPEMAARAH DVAALALRGN
101: LATLNFADSR WGLPVPASKD PKDIRQAAVM AAQAFSQDTE LVGVDYMNEE VNSNTIDEIK YQEIDIARAN DGSSSDFGAK ELCIDMENIL CCNWGEDNDM
201: LEMEGWQEKM AKGLLFSPTP RLGSCFSWDD VESDVEVSLW SYSI
Best Arabidopsis Sequence Match ( AT5G51990.1 )
(BLAST)
001: MNPFYSTFPD SFLSISDHRS PVSDSSECSP KLASSCPKKR AGRKKFRETR HPIYRGVRQR NSGKWVCEVR EPNKKSRIWL GTFPTVEMAA RAHDVAALAL
101: RGRSACLNFA DSAWRLRIPE TTCPKEIQKA ASEAAMAFQN ETTTEGSKTA AEAEEAAGEG VREGERRAEE QNGGVFYMDD EALLGMPNFF ENMAEGMLLP
201: PPEVGWNHND FDGVGDVSLW SFDE
Arabidopsis Description
DREB1DC-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:B2BJ26]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.