Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G25490.1 | OQU91781 | AT3G54610.1 | 16603259 |
| AT4G25490.1 | EER90868 | AT4G16420.1 | 16603259 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d021205_P001 | Maize | plastid | 71.64 | 80.08 |
| Zm00001d006169_P001 | Maize | plastid | 75.64 | 78.79 |
| Os09t0522100-00 | Rice | nucleus | 57.09 | 63.82 |
| TraesCS5A01G311700.1 | Wheat | nucleus | 51.27 | 60.52 |
| TraesCS5B01G312300.1 | Wheat | nucleus | 50.91 | 60.09 |
| TraesCS5D01G318600.1 | Wheat | nucleus | 50.91 | 60.09 |
| TraesCS6B01G218000.1 | Wheat | plastid | 52.36 | 59.02 |
| TraesCS6A01G186400.1 | Wheat | plastid | 50.55 | 58.65 |
| TraesCS5D01G318200.1 | Wheat | nucleus, plastid | 49.09 | 58.44 |
| TraesCS5B01G312700.1 | Wheat | nucleus | 51.64 | 58.44 |
| TraesCS6D01G173500.1 | Wheat | plastid | 51.27 | 58.02 |
| TraesCS6A01G381200.1 | Wheat | plastid | 51.64 | 57.96 |
| TraesCS6D01G365800.1 | Wheat | nucleus | 51.64 | 57.96 |
| TraesCS6D01G366100.1 | Wheat | nucleus | 51.27 | 57.79 |
| TraesCS5A01G311100.1 | Wheat | nucleus | 49.09 | 57.69 |
| TraesCS5B01G311900.1 | Wheat | plastid | 49.09 | 57.69 |
| TraesCS6B01G420100.1 | Wheat | nucleus | 51.27 | 57.55 |
| TraesCS5B01G312800.1 | Wheat | plastid | 50.18 | 57.5 |
| TraesCS5A01G311800.1 | Wheat | plastid | 50.91 | 57.38 |
| HORVU5Hr1G080340.1 | Barley | nucleus, plastid | 48.36 | 57.08 |
| TraesCS5D01G318400.1 | Wheat | nucleus | 49.45 | 56.9 |
| TraesCS5B01G312100.1 | Wheat | nucleus, plastid | 48.73 | 56.07 |
| HORVU5Hr1G080430.1 | Barley | nucleus | 49.09 | 56.02 |
| TraesCS5D01G318100.1 | Wheat | nucleus, plastid | 47.64 | 55.98 |
| HORVU5Hr1G080440.2 | Barley | nucleus, plastid | 49.82 | 55.92 |
| TraesCS5A01G311500.1 | Wheat | nucleus, plastid | 48.36 | 55.88 |
| TraesCS5D01G318800.1 | Wheat | nucleus, plastid | 48.73 | 55.83 |
| TraesCS6A01G381000.1 | Wheat | nucleus | 49.82 | 55.69 |
| TraesCS5A01G311900.1 | Wheat | nucleus | 48.36 | 55.65 |
| HORVU6Hr1G089320.1 | Barley | nucleus | 45.09 | 55.36 |
| TraesCS5B01G312900.1 | Wheat | nucleus | 49.09 | 55.33 |
| EER99212 | Sorghum | nucleus, plastid | 47.64 | 54.58 |
| TraesCS5A01G310000.1 | Wheat | plastid | 48.73 | 54.25 |
| EER99213 | Sorghum | nucleus | 45.45 | 53.19 |
| TraesCS5D01G317900.1 | Wheat | nucleus | 45.45 | 52.08 |
| TraesCS5D01G318500.1 | Wheat | nucleus | 45.82 | 51.85 |
| TraesCS5A01G311600.1 | Wheat | nucleus | 46.18 | 51.84 |
| TraesCS5B01G312200.1 | Wheat | nucleus | 45.45 | 51.02 |
| HORVU5Hr1G080380.1 | Barley | nucleus, plastid | 49.45 | 50.75 |
| HORVU5Hr1G080420.1 | Barley | nucleus, plastid | 51.64 | 50.0 |
| EER99214 | Sorghum | plastid | 44.0 | 49.59 |
| TraesCS5A01G310900.1 | Wheat | mitochondrion | 31.27 | 48.86 |
| EES14131 | Sorghum | nucleus, plastid | 41.45 | 47.5 |
| Solyc03g026280.2.1 | Tomato | nucleus | 31.64 | 41.43 |
| Solyc03g026270.1.1 | Tomato | nucleus | 30.55 | 40.98 |
| AT1G63030.2 | Thale cress | nucleus | 26.91 | 40.88 |
| PGSC0003DMT400037122 | Potato | nucleus | 32.0 | 40.55 |
| EES11288 | Sorghum | nucleus | 32.73 | 39.65 |
| Bra027612.1-P | Field mustard | nucleus | 26.55 | 39.46 |
| CDY49205 | Canola | nucleus | 26.55 | 39.46 |
| Bra019162.1-P | Field mustard | nucleus | 30.55 | 39.25 |
| CDY70584 | Canola | nucleus | 30.55 | 39.25 |
| CDX92710 | Canola | nucleus | 30.55 | 39.07 |
| KRH35383 | Soybean | nucleus | 29.09 | 39.02 |
| Bra022770.1-P | Field mustard | nucleus | 30.18 | 38.78 |
| CDX84868 | Canola | nucleus | 30.18 | 38.78 |
| CDY66018 | Canola | nucleus | 30.18 | 38.78 |
| Solyc03g124110.1.1 | Tomato | nucleus | 30.91 | 38.64 |
| AT4G25480.1 | Thale cress | nucleus | 30.18 | 38.43 |
| KRG91437 | Soybean | nucleus | 28.36 | 37.68 |
| PGSC0003DMT400037119 | Potato | mitochondrion | 16.36 | 36.89 |
| VIT_16s0100g00380.t01 | Wine grape | nucleus | 29.09 | 36.7 |
| AT4G25490.1 | Thale cress | nucleus | 28.36 | 36.62 |
| Solyc12g056430.1.1 | Tomato | nucleus | 26.91 | 36.45 |
| EES02136 | Sorghum | nucleus | 32.0 | 36.36 |
| CDY16016 | Canola | nucleus | 26.55 | 36.32 |
| CDY57075 | Canola | nucleus | 27.27 | 36.23 |
| VIT_02s0025g04460.t01 | Wine grape | nucleus | 30.91 | 36.17 |
| AT5G51990.1 | Thale cress | nucleus | 29.45 | 36.16 |
| PGSC0003DMT400037118 | Potato | mitochondrion | 17.09 | 36.15 |
| PGSC0003DMT400037120 | Potato | nucleus | 30.91 | 36.02 |
| CDY52356 | Canola | nucleus | 28.36 | 35.94 |
| Bra019777.1-P | Field mustard | nucleus | 26.91 | 35.92 |
| AT4G25470.1 | Thale cress | nucleus | 28.0 | 35.65 |
| Bra016763.1-P | Field mustard | nucleus | 26.18 | 35.64 |
| CDY71145 | Canola | nucleus | 26.18 | 35.64 |
| Bra026963.1-P | Field mustard | nucleus | 26.55 | 35.61 |
| CDY26574 | Canola | nucleus | 26.55 | 35.61 |
| Bra028290.1-P | Field mustard | nucleus | 28.36 | 35.45 |
| CDY00510 | Canola | nucleus | 28.36 | 35.45 |
| AT1G12610.1 | Thale cress | nucleus | 26.91 | 35.41 |
| CDY52360 | Canola | nucleus | 28.36 | 35.29 |
| CDY31925 | Canola | nucleus | 28.0 | 35.0 |
| KRH77483 | Soybean | nucleus | 28.73 | 34.96 |
| PGSC0003DMT400010876 | Potato | nucleus | 26.18 | 34.78 |
| CDY31270 | Canola | nucleus | 25.45 | 34.65 |
| KRH09144 | Soybean | nucleus | 29.09 | 34.63 |
| EER87753 | Sorghum | nucleus | 31.27 | 34.54 |
| CDY65499 | Canola | nucleus | 26.91 | 34.26 |
| PGSC0003DMT400032622 | Potato | nucleus | 29.45 | 34.03 |
| PGSC0003DMT400037121 | Potato | nucleus | 31.27 | 33.33 |
| PGSC0003DMT400032621 | Potato | nucleus | 29.45 | 33.2 |
| Solyc08g007820.1.1 | Tomato | nucleus | 29.45 | 33.2 |
| Solyc08g007830.1.1 | Tomato | nucleus | 27.27 | 32.75 |
| KRH57258 | Soybean | nucleus | 30.18 | 32.68 |
| KRH03987 | Soybean | nucleus | 29.45 | 31.76 |
| OQU89795 | Sorghum | mitochondrion, nucleus | 38.55 | 31.64 |
| Bra010461.1-P | Field mustard | nucleus | 28.73 | 30.62 |
| PGSC0003DMT400032623 | Potato | nucleus | 26.91 | 29.72 |
| CDY52358 | Canola | nucleus | 20.0 | 29.1 |
| CDY66013 | Canola | nucleus | 20.0 | 28.8 |
| Bra010460.1-P | Field mustard | nucleus | 28.0 | 28.0 |
| OQU85641 | Sorghum | nucleus | 33.45 | 27.63 |
| PGSC0003DMT400006896 | Potato | cytosol | 13.09 | 26.87 |
| Bra010463.1-P | Field mustard | nucleus | 20.73 | 25.45 |
| KRH38616 | Soybean | plastid | 28.73 | 24.16 |
| PGSC0003DMT400090651 | Potato | nucleus | 27.64 | 23.1 |
Protein Annotations
| Gene3D:3.30.730.10 | MapMan:35.1 | EntrezGene:8054868 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | UniProt:C5X625 |
| InterPro:DNA-bd_dom_sf | EnsemblPlants:EER99211 | ProteinID:EER99211 | ProteinID:EER99211.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PFscan:PS51032 |
| PANTHER:PTHR31839 | PANTHER:PTHR31839:SF5 | SMART:SM00380 | EnsemblPlantsGene:SORBI_3002G269100 | SUPFAM:SSF54171 | UniParc:UPI0001A83CF5 |
| RefSeq:XP_002462690.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:65296153..65296980
Molecular Weight (calculated)
28565.3 Da
IEP (calculated)
6.024
GRAVY (calculated)
-0.240
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMGRLQQHQ HATCSSSTST SASSTSSSEQ TIKAVVWSPS SSSSPQPPKK RPAGRTKFRE TRHPVYRGVR RRGAAGRWVC EVRVPGKRGA RLWLGTYLAA
101: ESAARAHDAA MLALGRGGAA GCLNFPDSAW LLAVPPPSAI SGLDDARRAA LEAVAEFQRR FGAAAAGGCG SVDEATSGVS APPLSTSSLP GISSGSPAPA
201: PELQQVPVKA GETATALDGD VFEPADWFGD MDMELDVYYA SLAEGLLVEP PPAPAAAWDH GDCCDAGADV ALWSY
101: ESAARAHDAA MLALGRGGAA GCLNFPDSAW LLAVPPPSAI SGLDDARRAA LEAVAEFQRR FGAAAAGGCG SVDEATSGVS APPLSTSSLP GISSGSPAPA
201: PELQQVPVKA GETATALDGD VFEPADWFGD MDMELDVYYA SLAEGLLVEP PPAPAAAWDH GDCCDAGADV ALWSY
001: MNSFSAFSEM FGSDYESSVS SGGDYIPTLA SSCPKKPAGR KKFRETRHPI YRGVRRRNSG KWVCEVREPN KKTRIWLGTF QTAEMAARAH DVAALALRGR
101: SACLNFADSA WRLRIPESTC AKDIQKAAAE AALAFQDEMC DATTDHGFDM EETLVEAIYT AEQSENAFYM HDEAMFEMPS LLANMAEGML LPLPSVQWNH
201: NHEVDGDDDD VSLWSY
101: SACLNFADSA WRLRIPESTC AKDIQKAAAE AALAFQDEMC DATTDHGFDM EETLVEAIYT AEQSENAFYM HDEAMFEMPS LLANMAEGML LPLPSVQWNH
201: NHEVDGDDDD VSLWSY
Arabidopsis Description
DREB1ADehydration-responsive element-binding protein 1A [Source:UniProtKB/Swiss-Prot;Acc:Q9M0L0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.