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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 5
  • nucleus 3
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G312800.1 Wheat plastid 91.67 91.67
HORVU5Hr1G080430.1 Barley nucleus 88.75 88.38
TraesCS5D01G318600.1 Wheat nucleus 60.0 61.8
TraesCS6D01G365800.1 Wheat nucleus 61.25 60.0
TraesCS6D01G366100.1 Wheat nucleus 60.83 59.84
TraesCS6D01G173500.1 Wheat plastid 60.42 59.67
TraesCS5D01G318400.1 Wheat nucleus 58.33 58.58
Os09t0522100-00 Rice nucleus 56.67 55.28
TraesCS5D01G318200.1 Wheat nucleus, plastid 52.92 54.98
TraesCS5D01G318100.1 Wheat nucleus, plastid 53.33 54.7
TraesCS5D01G318500.1 Wheat nucleus 54.17 53.5
Zm00001d021205_P001 Maize plastid 52.92 51.63
TraesCS5D01G317900.1 Wheat nucleus 51.25 51.25
Zm00001d006169_P001 Maize plastid 55.0 50.0
TraesCS5D01G318900.1 Wheat nucleus 49.17 49.58
EER99211 Sorghum plastid 55.83 48.73
TraesCS5D01G318300.1 Wheat nucleus 39.58 44.39
TraesCS5D01G317200.1 Wheat nucleus 38.75 43.66
TraesCS5D01G317700.1 Wheat nucleus 38.33 43.4
Solyc03g026280.2.1 Tomato nucleus 37.08 42.38
AT1G63030.2 Thale cress nucleus 31.25 41.44
TraesCS5D01G318000.1 Wheat nucleus 37.92 41.36
CDY49205 Canola nucleus 31.67 41.08
Bra027612.1-P Field mustard nucleus 31.67 41.08
Solyc03g026270.1.1 Tomato nucleus 35.0 40.98
TraesCS5D01G317800.1 Wheat nucleus 33.75 40.1
PGSC0003DMT400037122 Potato nucleus 36.25 40.09
CDX92710 Canola nucleus 35.42 39.53
KRH35383 Soybean nucleus 33.75 39.51
TraesCS5D01G317300.1 Wheat nucleus 37.5 39.13
TraesCS2D01G015200.1 Wheat nucleus 30.83 38.74
KRG91437 Soybean nucleus 33.33 38.65
VIT_16s0100g00380.t01 Wine grape nucleus 35.0 38.53
AT4G25490.1 Thale cress nucleus 34.17 38.5
TraesCS5D01G317500.1 Wheat nucleus 36.25 38.5
CDY66018 Canola nucleus 34.17 38.32
CDY70584 Canola nucleus 34.17 38.32
Bra019162.1-P Field mustard nucleus 34.17 38.32
Bra022770.1-P Field mustard nucleus 34.17 38.32
CDX84868 Canola nucleus 34.17 38.32
TraesCS6D01G238200.1 Wheat nucleus 34.58 38.25
Solyc03g124110.1.1 Tomato nucleus 35.0 38.18
CDY52356 Canola nucleus 34.17 37.79
TraesCS2D01G397000.1 Wheat nucleus 34.17 37.79
CDY31270 Canola nucleus 31.67 37.62
Bra016763.1-P Field mustard nucleus 31.67 37.62
CDY71145 Canola nucleus 31.67 37.62
CDY16016 Canola nucleus 31.25 37.31
Solyc12g056430.1.1 Tomato nucleus 31.25 36.95
Bra019777.1-P Field mustard nucleus 31.67 36.89
PGSC0003DMT400010876 Potato nucleus 31.67 36.72
CDY57075 Canola nucleus 31.67 36.72
Bra026963.1-P Field mustard nucleus 31.25 36.59
CDY26574 Canola nucleus 31.25 36.59
AT4G25480.1 Thale cress nucleus 32.5 36.11
AT1G12610.1 Thale cress nucleus 31.25 35.89
CDY52360 Canola nucleus 32.92 35.75
VIT_02s0025g04460.t01 Wine grape nucleus 35.0 35.74
PGSC0003DMT400032622 Potato nucleus 35.42 35.71
TraesCS5D01G317100.1 Wheat nucleus, plastid 40.0 35.69
AT4G25470.1 Thale cress nucleus 32.08 35.65
CDY65499 Canola nucleus 32.08 35.65
TraesCS7D01G052400.1 Wheat nucleus 32.5 35.62
PGSC0003DMT400037120 Potato nucleus 35.0 35.59
Bra028290.1-P Field mustard nucleus 32.5 35.45
CDY00510 Canola nucleus 32.5 35.45
PGSC0003DMT400037118 Potato mitochondrion 19.17 35.38
PGSC0003DMT400037121 Potato nucleus 37.92 35.27
PGSC0003DMT400037119 Potato mitochondrion 17.92 35.25
Solyc08g007820.1.1 Tomato nucleus 35.0 34.43
CDY31925 Canola nucleus 31.25 34.09
PGSC0003DMT400032621 Potato nucleus 34.58 34.02
TraesCS7D01G052600.1 Wheat nucleus 31.67 33.93
KRH57258 Soybean nucleus 35.83 33.86
KRH77483 Soybean nucleus 31.67 33.63
AT5G51990.1 Thale cress nucleus 31.25 33.48
TraesCS5D01G317400.1 Wheat nucleus 38.33 33.45
KRH09144 Soybean nucleus 32.08 33.33
TraesCS7D01G052500.1 Wheat nucleus 31.25 33.04
KRH03987 Soybean nucleus 35.0 32.94
CDY52358 Canola nucleus 25.83 32.8
TraesCS5D01G317600.1 Wheat nucleus, plastid 30.42 32.74
Bra010461.1-P Field mustard nucleus 34.58 32.17
CDY66013 Canola nucleus 25.42 31.94
Solyc08g007830.1.1 Tomato nucleus 30.42 31.88
PGSC0003DMT400032623 Potato nucleus 30.0 28.92
Bra010463.1-P Field mustard nucleus 26.67 28.57
Bra010460.1-P Field mustard nucleus 32.5 28.36
PGSC0003DMT400006896 Potato cytosol 15.83 28.36
PGSC0003DMT400090651 Potato nucleus 32.92 24.01
KRH38616 Soybean plastid 31.67 23.24
Protein Annotations
Gene3D:3.30.730.10MapMan:35.1InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfInterPro:DNA-bd_dom_sfGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0006139GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR001471InterPro:IPR036955
PFAM:PF00847PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31839PANTHER:PTHR31839:SF5SMART:SM00380
SUPFAM:SSF54171EnsemblPlantsGene:TraesCS5D01G318800EnsemblPlants:TraesCS5D01G318800.1TIGR:cd00018SEG:seg:
Description
No Description!
Coordinates
chr5D:-:411789939..411790661
Molecular Weight (calculated)
25379.5 Da
IEP (calculated)
4.737
GRAVY (calculated)
-0.319
Length
240 amino acids
Sequence
(BLAST)
001: MGMGLEISSS FPSSSNENAL VAKRPAGRTK FRETRHPVYR GVRRRGNAQR WVCEVRVPGK RGARLWLGTY ATAEIAARAN DAAMLALGGR SAARLNFPDS
101: AWLLAVPSAH SDLADVRRAA VEAVADLQRR EAAGGSITAT ATAEETSCGA PAESSSESDD AGSSETSKPS GNGDFALPGG MDVEMFSRLD LFPEMDFGSY
201: YASLAEALLM DPPPVATGTG AYWDNGECGE GATDFALWSY
Best Arabidopsis Sequence Match ( AT1G12610.1 )
(BLAST)
001: MNNDDIILAE MRPKKRAGRR VFKETRHPVY RGIRRRNGDK WVCEVREPTH QRRIWLGTYP TADMAARAHD VAVLALRGRS ACLNFADSAW RLPVPESNDP
101: DVIRRVAAEA AEMFRPVDLE SGITVLPCAG DDVDLGFGSG SGSGSGSEER NSSSYGFGDY EEVSTTMMRL AEGPLMSPPR SYMEDMTPTN VYTEEEMCYE
201: DMSLWSYRY
Arabidopsis Description
DREB1FDehydration-responsive element-binding protein 1F [Source:UniProtKB/Swiss-Prot;Acc:Q9LN86]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.