Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5B01G312800.1 | Wheat | plastid | 91.67 | 91.67 |
HORVU5Hr1G080430.1 | Barley | nucleus | 88.75 | 88.38 |
TraesCS5D01G318600.1 | Wheat | nucleus | 60.0 | 61.8 |
TraesCS6D01G365800.1 | Wheat | nucleus | 61.25 | 60.0 |
TraesCS6D01G366100.1 | Wheat | nucleus | 60.83 | 59.84 |
TraesCS6D01G173500.1 | Wheat | plastid | 60.42 | 59.67 |
TraesCS5D01G318400.1 | Wheat | nucleus | 58.33 | 58.58 |
Os09t0522100-00 | Rice | nucleus | 56.67 | 55.28 |
TraesCS5D01G318200.1 | Wheat | nucleus, plastid | 52.92 | 54.98 |
TraesCS5D01G318100.1 | Wheat | nucleus, plastid | 53.33 | 54.7 |
TraesCS5D01G318500.1 | Wheat | nucleus | 54.17 | 53.5 |
Zm00001d021205_P001 | Maize | plastid | 52.92 | 51.63 |
TraesCS5D01G317900.1 | Wheat | nucleus | 51.25 | 51.25 |
Zm00001d006169_P001 | Maize | plastid | 55.0 | 50.0 |
TraesCS5D01G318900.1 | Wheat | nucleus | 49.17 | 49.58 |
EER99211 | Sorghum | plastid | 55.83 | 48.73 |
TraesCS5D01G318300.1 | Wheat | nucleus | 39.58 | 44.39 |
TraesCS5D01G317200.1 | Wheat | nucleus | 38.75 | 43.66 |
TraesCS5D01G317700.1 | Wheat | nucleus | 38.33 | 43.4 |
Solyc03g026280.2.1 | Tomato | nucleus | 37.08 | 42.38 |
AT1G63030.2 | Thale cress | nucleus | 31.25 | 41.44 |
TraesCS5D01G318000.1 | Wheat | nucleus | 37.92 | 41.36 |
CDY49205 | Canola | nucleus | 31.67 | 41.08 |
Bra027612.1-P | Field mustard | nucleus | 31.67 | 41.08 |
Solyc03g026270.1.1 | Tomato | nucleus | 35.0 | 40.98 |
TraesCS5D01G317800.1 | Wheat | nucleus | 33.75 | 40.1 |
PGSC0003DMT400037122 | Potato | nucleus | 36.25 | 40.09 |
CDX92710 | Canola | nucleus | 35.42 | 39.53 |
KRH35383 | Soybean | nucleus | 33.75 | 39.51 |
TraesCS5D01G317300.1 | Wheat | nucleus | 37.5 | 39.13 |
TraesCS2D01G015200.1 | Wheat | nucleus | 30.83 | 38.74 |
KRG91437 | Soybean | nucleus | 33.33 | 38.65 |
VIT_16s0100g00380.t01 | Wine grape | nucleus | 35.0 | 38.53 |
AT4G25490.1 | Thale cress | nucleus | 34.17 | 38.5 |
TraesCS5D01G317500.1 | Wheat | nucleus | 36.25 | 38.5 |
CDY66018 | Canola | nucleus | 34.17 | 38.32 |
CDY70584 | Canola | nucleus | 34.17 | 38.32 |
Bra019162.1-P | Field mustard | nucleus | 34.17 | 38.32 |
Bra022770.1-P | Field mustard | nucleus | 34.17 | 38.32 |
CDX84868 | Canola | nucleus | 34.17 | 38.32 |
TraesCS6D01G238200.1 | Wheat | nucleus | 34.58 | 38.25 |
Solyc03g124110.1.1 | Tomato | nucleus | 35.0 | 38.18 |
CDY52356 | Canola | nucleus | 34.17 | 37.79 |
TraesCS2D01G397000.1 | Wheat | nucleus | 34.17 | 37.79 |
CDY31270 | Canola | nucleus | 31.67 | 37.62 |
Bra016763.1-P | Field mustard | nucleus | 31.67 | 37.62 |
CDY71145 | Canola | nucleus | 31.67 | 37.62 |
CDY16016 | Canola | nucleus | 31.25 | 37.31 |
Solyc12g056430.1.1 | Tomato | nucleus | 31.25 | 36.95 |
Bra019777.1-P | Field mustard | nucleus | 31.67 | 36.89 |
PGSC0003DMT400010876 | Potato | nucleus | 31.67 | 36.72 |
CDY57075 | Canola | nucleus | 31.67 | 36.72 |
Bra026963.1-P | Field mustard | nucleus | 31.25 | 36.59 |
CDY26574 | Canola | nucleus | 31.25 | 36.59 |
AT4G25480.1 | Thale cress | nucleus | 32.5 | 36.11 |
AT1G12610.1 | Thale cress | nucleus | 31.25 | 35.89 |
CDY52360 | Canola | nucleus | 32.92 | 35.75 |
VIT_02s0025g04460.t01 | Wine grape | nucleus | 35.0 | 35.74 |
PGSC0003DMT400032622 | Potato | nucleus | 35.42 | 35.71 |
TraesCS5D01G317100.1 | Wheat | nucleus, plastid | 40.0 | 35.69 |
AT4G25470.1 | Thale cress | nucleus | 32.08 | 35.65 |
CDY65499 | Canola | nucleus | 32.08 | 35.65 |
TraesCS7D01G052400.1 | Wheat | nucleus | 32.5 | 35.62 |
PGSC0003DMT400037120 | Potato | nucleus | 35.0 | 35.59 |
Bra028290.1-P | Field mustard | nucleus | 32.5 | 35.45 |
CDY00510 | Canola | nucleus | 32.5 | 35.45 |
PGSC0003DMT400037118 | Potato | mitochondrion | 19.17 | 35.38 |
PGSC0003DMT400037121 | Potato | nucleus | 37.92 | 35.27 |
PGSC0003DMT400037119 | Potato | mitochondrion | 17.92 | 35.25 |
Solyc08g007820.1.1 | Tomato | nucleus | 35.0 | 34.43 |
CDY31925 | Canola | nucleus | 31.25 | 34.09 |
PGSC0003DMT400032621 | Potato | nucleus | 34.58 | 34.02 |
TraesCS7D01G052600.1 | Wheat | nucleus | 31.67 | 33.93 |
KRH57258 | Soybean | nucleus | 35.83 | 33.86 |
KRH77483 | Soybean | nucleus | 31.67 | 33.63 |
AT5G51990.1 | Thale cress | nucleus | 31.25 | 33.48 |
TraesCS5D01G317400.1 | Wheat | nucleus | 38.33 | 33.45 |
KRH09144 | Soybean | nucleus | 32.08 | 33.33 |
TraesCS7D01G052500.1 | Wheat | nucleus | 31.25 | 33.04 |
KRH03987 | Soybean | nucleus | 35.0 | 32.94 |
CDY52358 | Canola | nucleus | 25.83 | 32.8 |
TraesCS5D01G317600.1 | Wheat | nucleus, plastid | 30.42 | 32.74 |
Bra010461.1-P | Field mustard | nucleus | 34.58 | 32.17 |
CDY66013 | Canola | nucleus | 25.42 | 31.94 |
Solyc08g007830.1.1 | Tomato | nucleus | 30.42 | 31.88 |
PGSC0003DMT400032623 | Potato | nucleus | 30.0 | 28.92 |
Bra010463.1-P | Field mustard | nucleus | 26.67 | 28.57 |
Bra010460.1-P | Field mustard | nucleus | 32.5 | 28.36 |
PGSC0003DMT400006896 | Potato | cytosol | 15.83 | 28.36 |
PGSC0003DMT400090651 | Potato | nucleus | 32.92 | 24.01 |
KRH38616 | Soybean | plastid | 31.67 | 23.24 |
Protein Annotations
Gene3D:3.30.730.10 | MapMan:35.1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31839 | PANTHER:PTHR31839:SF5 | SMART:SM00380 |
SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS5D01G318800 | EnsemblPlants:TraesCS5D01G318800.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr5D:-:411789939..411790661
Molecular Weight (calculated)
25379.5 Da
IEP (calculated)
4.737
GRAVY (calculated)
-0.319
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMGLEISSS FPSSSNENAL VAKRPAGRTK FRETRHPVYR GVRRRGNAQR WVCEVRVPGK RGARLWLGTY ATAEIAARAN DAAMLALGGR SAARLNFPDS
101: AWLLAVPSAH SDLADVRRAA VEAVADLQRR EAAGGSITAT ATAEETSCGA PAESSSESDD AGSSETSKPS GNGDFALPGG MDVEMFSRLD LFPEMDFGSY
201: YASLAEALLM DPPPVATGTG AYWDNGECGE GATDFALWSY
101: AWLLAVPSAH SDLADVRRAA VEAVADLQRR EAAGGSITAT ATAEETSCGA PAESSSESDD AGSSETSKPS GNGDFALPGG MDVEMFSRLD LFPEMDFGSY
201: YASLAEALLM DPPPVATGTG AYWDNGECGE GATDFALWSY
001: MNNDDIILAE MRPKKRAGRR VFKETRHPVY RGIRRRNGDK WVCEVREPTH QRRIWLGTYP TADMAARAHD VAVLALRGRS ACLNFADSAW RLPVPESNDP
101: DVIRRVAAEA AEMFRPVDLE SGITVLPCAG DDVDLGFGSG SGSGSGSEER NSSSYGFGDY EEVSTTMMRL AEGPLMSPPR SYMEDMTPTN VYTEEEMCYE
201: DMSLWSYRY
101: DVIRRVAAEA AEMFRPVDLE SGITVLPCAG DDVDLGFGSG SGSGSGSEER NSSSYGFGDY EEVSTTMMRL AEGPLMSPPR SYMEDMTPTN VYTEEEMCYE
201: DMSLWSYRY
Arabidopsis Description
DREB1FDehydration-responsive element-binding protein 1F [Source:UniProtKB/Swiss-Prot;Acc:Q9LN86]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.