Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026963.1-P | Field mustard | nucleus | 99.0 | 97.07 |
| CDY26574 | Canola | nucleus | 99.0 | 97.07 |
| CDY57075 | Canola | nucleus | 88.06 | 85.51 |
| CDY71145 | Canola | nucleus | 84.08 | 83.66 |
| CDY31270 | Canola | nucleus | 81.09 | 80.69 |
| AT1G12610.1 | Thale cress | nucleus | 82.59 | 79.43 |
| CDY49205 | Canola | nucleus | 66.17 | 71.89 |
| VIT_16s0100g00380.t01 | Wine grape | nucleus | 51.24 | 47.25 |
| PGSC0003DMT400037119 | Potato | mitochondrion | 27.86 | 45.9 |
| Solyc03g026270.1.1 | Tomato | nucleus | 46.77 | 45.85 |
| HORVU5Hr1G041600.1 | Barley | nucleus | 30.35 | 45.52 |
| GSMUA_Achr11P... | Banana | nucleus | 46.77 | 45.19 |
| PGSC0003DMT400037122 | Potato | nucleus | 48.76 | 45.16 |
| CDY00510 | Canola | nucleus | 48.76 | 44.55 |
| KRH77483 | Soybean | nucleus | 49.75 | 44.25 |
| CDY31925 | Canola | nucleus | 48.26 | 44.09 |
| Solyc03g124110.1.1 | Tomato | nucleus | 48.26 | 44.09 |
| CDY70584 | Canola | nucleus | 46.77 | 43.93 |
| GSMUA_Achr8P11980_001 | Banana | nucleus | 45.77 | 43.6 |
| CDY66018 | Canola | nucleus | 46.27 | 43.46 |
| Solyc03g026280.2.1 | Tomato | nucleus | 45.27 | 43.33 |
| CDX84868 | Canola | nucleus | 45.77 | 42.99 |
| GSMUA_Achr6P13340_001 | Banana | nucleus | 40.8 | 42.93 |
| CDX92710 | Canola | nucleus | 45.77 | 42.79 |
| GSMUA_Achr7P05900_001 | Banana | nucleus | 43.28 | 42.23 |
| HORVU0Hr1G016540.1 | Barley | nucleus | 45.27 | 41.94 |
| TraesCS6A01G256900.1 | Wheat | nucleus | 45.27 | 41.94 |
| TraesCS6B01G268100.1 | Wheat | nucleus | 45.27 | 41.94 |
| TraesCS6D01G238200.1 | Wheat | nucleus | 45.27 | 41.94 |
| Zm00001d002618_P001 | Maize | nucleus | 46.27 | 41.89 |
| CDY52356 | Canola | nucleus | 44.78 | 41.47 |
| CDY52360 | Canola | nucleus | 44.78 | 40.72 |
| Os02t0677300-02 | Rice | nucleus | 45.27 | 40.62 |
| EES11288 | Sorghum | nucleus | 45.77 | 40.53 |
| PGSC0003DMT400037118 | Potato | mitochondrion | 25.87 | 40.0 |
| CDY65499 | Canola | nucleus | 42.79 | 39.81 |
| Os04t0572400-00 | Rice | nucleus | 43.28 | 39.73 |
| PGSC0003DMT400037120 | Potato | nucleus | 45.77 | 38.98 |
| TraesCS2A01G399500.1 | Wheat | nucleus, plastid | 41.79 | 38.53 |
| TraesCS2D01G397000.1 | Wheat | nucleus | 41.29 | 38.25 |
| Zm00001d017592_P001 | Maize | nucleus | 43.78 | 38.1 |
| TraesCS2D01G015200.1 | Wheat | nucleus | 35.82 | 37.7 |
| GSMUA_Achr10P... | Banana | nucleus | 42.29 | 37.61 |
| KRH57258 | Soybean | nucleus | 47.26 | 37.4 |
| GSMUA_Achr2P20280_001 | Banana | nucleus | 37.31 | 37.31 |
| GSMUA_Achr8P16070_001 | Banana | nucleus, plastid | 35.82 | 37.31 |
| KRH03987 | Soybean | nucleus | 47.26 | 37.25 |
| Os06t0127100-01 | Rice | nucleus | 39.3 | 36.92 |
| HORVU6Hr1G065580.4 | Barley | nucleus, plastid | 41.29 | 36.89 |
| PGSC0003DMT400037121 | Potato | nucleus | 47.26 | 36.82 |
| TraesCS5D01G318000.1 | Wheat | nucleus | 40.3 | 36.82 |
| TraesCS5A01G310600.1 | Wheat | nucleus | 40.8 | 36.44 |
| TraesCS5A01G311000.1 | Wheat | nucleus | 39.8 | 36.36 |
| TraesCS5B01G311700.1 | Wheat | nucleus | 39.8 | 36.36 |
| TraesCS2B01G002700.1 | Wheat | nucleus, plastid | 34.33 | 36.32 |
| HORVU5Hr1G080310.1 | Barley | nucleus | 39.8 | 36.2 |
| TraesCS5D01G318600.1 | Wheat | nucleus | 41.79 | 36.05 |
| TraesCS5D01G317500.1 | Wheat | nucleus | 40.3 | 35.84 |
| HORVU5Hr1G080220.2 | Barley | nucleus | 39.8 | 35.71 |
| TraesCS5B01G311600.1 | Wheat | nucleus | 35.82 | 35.64 |
| CDY66013 | Canola | nucleus | 33.83 | 35.6 |
| CDY52358 | Canola | nucleus | 33.33 | 35.45 |
| TraesCS5B01G311200.1 | Wheat | nucleus | 39.8 | 35.24 |
| TraesCS7A01G057800.1 | Wheat | nucleus, plastid | 36.82 | 35.24 |
| TraesCS2B01G417500.1 | Wheat | nucleus | 37.31 | 35.21 |
| Os01t0968800-00 | Rice | nucleus | 38.31 | 35.16 |
| TraesCS7D01G052400.1 | Wheat | nucleus | 38.31 | 35.16 |
| Zm00001d041981_P001 | Maize | nucleus | 42.79 | 35.1 |
| TraesCS5A01G311300.1 | Wheat | nucleus | 36.82 | 34.91 |
| TraesCS5B01G311500.1 | Wheat | nucleus | 36.82 | 34.91 |
| TraesCS5A01G310400.1 | Wheat | nucleus | 39.8 | 34.78 |
| TraesCS5D01G317300.1 | Wheat | nucleus | 39.8 | 34.78 |
| TraesCS5A01G311700.1 | Wheat | nucleus | 40.3 | 34.76 |
| TraesCS7A01G057700.1 | Wheat | nucleus | 38.81 | 34.67 |
| TraesCS5D01G317800.1 | Wheat | nucleus | 34.83 | 34.65 |
| TraesCS5B01G312000.1 | Wheat | nucleus | 36.82 | 34.58 |
| TraesCS5D01G318300.1 | Wheat | nucleus | 36.82 | 34.58 |
| TraesCS5A01G310200.1 | Wheat | nucleus | 36.32 | 34.43 |
| TraesCS5D01G317700.1 | Wheat | nucleus | 36.32 | 34.43 |
| TraesCS5B01G312300.1 | Wheat | nucleus | 39.8 | 34.33 |
| EES02136 | Sorghum | nucleus | 41.29 | 34.3 |
| TraesCS5B01G310900.1 | Wheat | nucleus | 29.85 | 34.29 |
| TraesCS4A01G433300.1 | Wheat | nucleus | 36.82 | 34.26 |
| TraesCS1B01G335100.1 | Wheat | nucleus | 37.81 | 34.23 |
| TraesCS5A01G310700.1 | Wheat | nucleus | 37.81 | 34.23 |
| TraesCS5B01G311400.1 | Wheat | nucleus | 37.81 | 34.23 |
| TraesCS5D01G317200.1 | Wheat | nucleus | 35.82 | 33.8 |
| TraesCS5A01G310800.1 | Wheat | nucleus | 36.32 | 33.8 |
| HORVU5Hr1G080340.1 | Barley | nucleus, plastid | 38.81 | 33.48 |
| TraesCS4A01G433200.1 | Wheat | nucleus | 37.81 | 33.33 |
| HORVU5Hr1G080350.1 | Barley | nucleus | 35.32 | 33.18 |
| TraesCS5D01G318200.1 | Wheat | nucleus, plastid | 37.81 | 32.9 |
| HORVU5Hr1G080300.1 | Barley | nucleus | 36.82 | 32.89 |
| Zm00001d052732_P001 | Maize | plastid | 36.32 | 32.74 |
| TraesCS7D01G052500.1 | Wheat | nucleus | 36.82 | 32.6 |
| TraesCS7D01G052600.1 | Wheat | nucleus | 36.32 | 32.59 |
| HORVU7Hr1G010510.2 | Barley | nucleus | 32.84 | 32.2 |
| TraesCS5A01G311100.1 | Wheat | nucleus | 37.31 | 32.05 |
| TraesCS5B01G311900.1 | Wheat | plastid | 37.31 | 32.05 |
| HORVU5Hr1G080430.1 | Barley | nucleus | 38.31 | 31.95 |
| HORVU5Hr1G080440.2 | Barley | nucleus, plastid | 38.81 | 31.84 |
| TraesCS6A01G381200.1 | Wheat | plastid | 38.81 | 31.84 |
| TraesCS6D01G173500.1 | Wheat | plastid | 38.31 | 31.69 |
| TraesCS5B01G312800.1 | Wheat | plastid | 37.81 | 31.67 |
| TraesCS6A01G186400.1 | Wheat | plastid | 37.31 | 31.65 |
| TraesCS5D01G318100.1 | Wheat | nucleus, plastid | 36.82 | 31.62 |
| TraesCS6B01G218000.1 | Wheat | plastid | 38.31 | 31.56 |
| Zm00001d036003_P001 | Maize | nucleus | 36.32 | 31.47 |
| TraesCS6D01G365800.1 | Wheat | nucleus | 38.31 | 31.43 |
| TraesCS5A01G311900.1 | Wheat | nucleus | 37.31 | 31.38 |
| HORVU6Hr1G089320.1 | Barley | nucleus | 34.83 | 31.25 |
| TraesCS5D01G318800.1 | Wheat | nucleus, plastid | 37.31 | 31.25 |
| TraesCS6D01G366100.1 | Wheat | nucleus | 37.81 | 31.15 |
| TraesCS6B01G420100.1 | Wheat | nucleus | 37.81 | 31.02 |
| TraesCS5D01G318400.1 | Wheat | nucleus | 36.82 | 30.96 |
| EER87753 | Sorghum | nucleus | 38.31 | 30.92 |
| TraesCS5B01G312900.1 | Wheat | nucleus | 37.31 | 30.74 |
| TraesCS5B01G313000.1 | Wheat | nucleus | 35.82 | 30.51 |
| Os09t0522100-00 | Rice | nucleus | 37.31 | 30.49 |
| TraesCS6A01G381000.1 | Wheat | nucleus | 37.31 | 30.49 |
| TraesCS5B01G312700.1 | Wheat | nucleus | 36.82 | 30.45 |
| Zm00001d006170_P001 | Maize | nucleus | 34.83 | 30.43 |
| Zm00001d031728_P001 | Maize | nucleus, plastid | 34.33 | 30.4 |
| TraesCS5A01G311800.1 | Wheat | plastid | 36.82 | 30.33 |
| Os09t0522200-01 | Rice | nucleus | 35.82 | 30.25 |
| TraesCS5A01G311500.1 | Wheat | nucleus, plastid | 35.82 | 30.25 |
| TraesCS5D01G318900.1 | Wheat | nucleus | 35.82 | 30.25 |
| EER99213 | Sorghum | nucleus | 35.32 | 30.21 |
| TraesCS5B01G312100.1 | Wheat | nucleus, plastid | 35.82 | 30.13 |
| Zm00001d021205_P001 | Maize | plastid | 36.32 | 29.67 |
| TraesCS5A01G310000.1 | Wheat | plastid | 36.32 | 29.55 |
| EER99214 | Sorghum | plastid | 35.82 | 29.51 |
| Zm00001d021208_P001 | Maize | plastid | 33.83 | 29.44 |
| EER99212 | Sorghum | nucleus, plastid | 34.83 | 29.17 |
| TraesCS5A01G312000.1 | Wheat | plastid | 34.83 | 28.93 |
| TraesCS5D01G318500.1 | Wheat | nucleus | 34.83 | 28.81 |
| EES14131 | Sorghum | nucleus, plastid | 34.33 | 28.75 |
| HORVU5Hr1G080400.1 | Barley | nucleus, plastid | 14.93 | 28.57 |
| TraesCS5A01G311600.1 | Wheat | nucleus | 34.83 | 28.57 |
| TraesCS5B01G312200.1 | Wheat | nucleus | 34.83 | 28.57 |
| Zm00001d021207_P001 | Maize | nucleus | 33.83 | 28.57 |
| TraesCS5D01G317900.1 | Wheat | nucleus | 33.33 | 27.92 |
| TraesCS5A01G310100.1 | Wheat | nucleus | 37.31 | 27.88 |
| TraesCS5B01G310800.1 | Wheat | nucleus | 37.31 | 27.88 |
| TraesCS5D01G317100.1 | Wheat | nucleus, plastid | 36.82 | 27.51 |
| HORVU5Hr1G080420.1 | Barley | nucleus, plastid | 38.81 | 27.46 |
| TraesCS5A01G310500.1 | Wheat | nucleus, plastid | 36.82 | 26.91 |
| PGSC0003DMT400090651 | Potato | nucleus | 43.78 | 26.75 |
| GSMUA_Achr4P19660_001 | Banana | mitochondrion, nucleus | 42.29 | 26.73 |
| EER99211 | Sorghum | plastid | 36.32 | 26.55 |
| TraesCS5D01G317400.1 | Wheat | nucleus | 36.32 | 26.55 |
| Zm00001d006169_P001 | Maize | plastid | 34.83 | 26.52 |
| HORVU5Hr1G080380.1 | Barley | nucleus, plastid | 35.32 | 26.49 |
| TraesCS5D01G317600.1 | Wheat | nucleus, plastid | 29.35 | 26.46 |
| TraesCS5A01G310900.1 | Wheat | mitochondrion | 22.89 | 26.14 |
| OQU85641 | Sorghum | nucleus | 43.28 | 26.13 |
| HORVU5Hr1G080230.1 | Barley | nucleus | 36.32 | 25.09 |
| HORVU5Hr1G080450.1 | Barley | nucleus, plastid | 35.32 | 23.59 |
| TraesCS5B01G311300.1 | Wheat | nucleus | 32.84 | 22.76 |
| OQU89795 | Sorghum | mitochondrion, nucleus | 37.81 | 22.69 |
| Os06t0165600-01 | Rice | nucleus, plastid | 27.36 | 21.74 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | GO:A0A078FSF9 | UniProt:A0A078FSF9 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY16016 | ProteinID:CDY16016 | ProteinID:CDY16016.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00090402001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31839 | PANTHER:PTHR31839:SF8 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EBB7CB | : | : | : | : | : |
Description
BnaC08g41070DBnaC08g41070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSF9]
Coordinates
chrLK032060:-:199470..200271
Molecular Weight (calculated)
23087.3 Da
IEP (calculated)
5.185
GRAVY (calculated)
-0.634
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNNDDIMLA EMRPKKRAGR IVFKETRHPV YRGIRRRNGD KWVCEIREPT HQRRIWLGTY PTAEMAARAH DVAAFALRGR SACLNFADSA WRLPVPESTD
101: PDVIRRVAAE AAEMFRPTEF ESGITVLPSY GNEVYLGSGS GWEERNMYGY VEEEEVSTTM RRLASEPLMS PPRSYMEGMT SNAYMGEEMC CEDTSLWSYS
201: Y
101: PDVIRRVAAE AAEMFRPTEF ESGITVLPSY GNEVYLGSGS GWEERNMYGY VEEEEVSTTM RRLASEPLMS PPRSYMEGMT SNAYMGEEMC CEDTSLWSYS
201: Y
001: MNNDDIILAE MRPKKRAGRR VFKETRHPVY RGIRRRNGDK WVCEVREPTH QRRIWLGTYP TADMAARAHD VAVLALRGRS ACLNFADSAW RLPVPESNDP
101: DVIRRVAAEA AEMFRPVDLE SGITVLPCAG DDVDLGFGSG SGSGSGSEER NSSSYGFGDY EEVSTTMMRL AEGPLMSPPR SYMEDMTPTN VYTEEEMCYE
201: DMSLWSYRY
101: DVIRRVAAEA AEMFRPVDLE SGITVLPCAG DDVDLGFGSG SGSGSGSEER NSSSYGFGDY EEVSTTMMRL AEGPLMSPPR SYMEDMTPTN VYTEEEMCYE
201: DMSLWSYRY
Arabidopsis Description
DREB1FDehydration-responsive element-binding protein 1F [Source:UniProtKB/Swiss-Prot;Acc:Q9LN86]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.