Factsheet for Zm00001d052732_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d013265_P003
Zm00001d014175_P004
Zm00001d034033_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G25490.1	Zm00001d014175_P004	AT3G54610.1	16603259
AT4G25490.1	Zm00001d013265_P003	AT4G16420.1	16603259
AT4G25490.1	Zm00001d034033_P002	AT4G16420.1	16603259

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006170_P001	Maize	nucleus	56.05	54.35
Zm00001d021208_P001	Maize	plastid	55.16	53.25
Zm00001d021207_P001	Maize	nucleus	56.5	52.94
Zm00001d021205_P001	Maize	plastid	54.26	49.19
Zm00001d031728_P001	Maize	nucleus, plastid	49.78	48.9
Zm00001d006169_P001	Maize	plastid	52.91	44.7
AT1G63030.2	Thale cress	nucleus	34.53	42.54
Solyc03g026270.1.1	Tomato	nucleus	37.67	40.98
CDY49205	Canola	nucleus	33.18	40.0
Bra027612.1-P	Field mustard	nucleus	33.18	40.0
Zm00001d002618_P001	Maize	nucleus	39.01	39.19
KRH35383	Soybean	nucleus	35.87	39.02
VIT_16s0100g00380.t01	Wine grape	nucleus	38.12	38.99
Zm00001d017592_P001	Maize	nucleus	40.36	38.96
PGSC0003DMT400037122	Potato	nucleus	37.67	38.71
KRG91437	Soybean	nucleus	35.87	38.65
Solyc03g026280.2.1	Tomato	nucleus	36.32	38.57
PGSC0003DMT400037119	Potato	mitochondrion	21.08	38.52
CDY31270	Canola	nucleus	34.53	38.12
Bra016763.1-P	Field mustard	nucleus	34.08	37.62
CDY71145	Canola	nucleus	34.08	37.62
CDY57075	Canola	nucleus	34.08	36.72
AT1G12610.1	Thale cress	nucleus	34.08	36.36
CDY16016	Canola	nucleus	32.74	36.32
Bra019777.1-P	Field mustard	nucleus	33.18	35.92
Solyc03g124110.1.1	Tomato	nucleus	35.43	35.91
AT4G25480.1	Thale cress	nucleus	34.53	35.65
CDY26574	Canola	nucleus	32.74	35.61
Bra026963.1-P	Field mustard	nucleus	32.74	35.61
Zm00001d041981_P001	Maize	nucleus	39.01	35.51
PGSC0003DMT400037118	Potato	mitochondrion	20.63	35.38
CDY52356	Canola	nucleus	34.08	35.02
PGSC0003DMT400010876	Potato	nucleus	32.29	34.78
PGSC0003DMT400037120	Potato	nucleus	36.77	34.75
CDY66018	Canola	nucleus	33.18	34.58
Bra022770.1-P	Field mustard	nucleus	33.18	34.58
CDX84868	Canola	nucleus	33.18	34.58
Solyc12g056430.1.1	Tomato	nucleus	31.39	34.48
CDX92710	Canola	nucleus	33.18	34.42
AT4G25490.1	Thale cress	nucleus	32.74	34.27
CDY70584	Canola	nucleus	32.74	34.11
Bra019162.1-P	Field mustard	nucleus	32.74	34.11
Bra028290.1-P	Field mustard	nucleus	33.63	34.09
CDY00510	Canola	nucleus	33.63	34.09
Zm00001d036003_P001	Maize	nucleus	35.43	34.05
CDY52360	Canola	nucleus	33.18	33.48
AT4G25470.1	Thale cress	nucleus	32.29	33.33
CDY65499	Canola	nucleus	32.29	33.33
VIT_02s0025g04460.t01	Wine grape	nucleus	34.98	33.19
CDY31925	Canola	nucleus	32.74	33.18
AT5G51990.1	Thale cress	nucleus	33.18	33.04
PGSC0003DMT400032622	Potato	nucleus	34.98	32.77
PGSC0003DMT400037121	Potato	nucleus	36.77	31.78
KRH09144	Soybean	nucleus	32.74	31.6
PGSC0003DMT400032621	Potato	nucleus	34.53	31.56
Solyc08g007820.1.1	Tomato	nucleus	34.53	31.56
Solyc08g007830.1.1	Tomato	nucleus	31.84	31.0
KRH57258	Soybean	nucleus	34.98	30.71
KRH77483	Soybean	nucleus	30.94	30.53
KRH03987	Soybean	nucleus	33.63	29.41
PGSC0003DMT400032623	Potato	nucleus	32.74	29.32
CDY52358	Canola	nucleus	24.66	29.1
Bra010461.1-P	Field mustard	nucleus	33.63	29.07
CDY66013	Canola	nucleus	24.66	28.8
Bra010460.1-P	Field mustard	nucleus	33.18	26.91
PGSC0003DMT400090651	Potato	nucleus	38.56	26.14
PGSC0003DMT400006896	Potato	cytosol	15.25	25.37
Bra010463.1-P	Field mustard	nucleus	25.11	25.0
KRH38616	Soybean	plastid	33.18	22.63

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.1	UniProt:A0A1D6QJD9	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:AQK57900.1
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	PFAM:PF00847	PFscan:PS51032	PANTHER:PTHR31839	PANTHER:PTHR31839:SF10	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI000845821A	EnsemblPlantsGene:Zm00001d052732	EnsemblPlants:Zm00001d052732_P001	EnsemblPlants:Zm00001d052732_T001	SEG:seg

Description

Dehydration-responsive element-binding protein 1B

Coordinates

chr4:-:199279976..199280647

Molecular Weight (calculated)

23531.7 Da

IEP (calculated)

7.308

GRAVY (calculated)

-0.249

Length

223 amino acids

Sequence
(BLAST)

001: MMPPPPSSSS SPSQDAGSPK RAAGRNKFRE TRHPVFRGVR RRGRAGGRWR WVCEVRVPGR RGCRLWLGTF AAAEAAARAH DAAMLALRGG AARARCLNFP
101: DSAWLLDVPV LPLPHGAAPW ADVRRAVAIA VEGFFRARPA AEDAMSATSE PSSAATEAEA EASSSSGTDG GAPEASPFEL DMLSDMGAGL YYACLAQGLL
201: VEPPPLDAPC PDDSDCGLAL WSY

Best Arabidopsis Sequence Match ( AT5G51990.1 )
(BLAST)

001: MNPFYSTFPD SFLSISDHRS PVSDSSECSP KLASSCPKKR AGRKKFRETR HPIYRGVRQR NSGKWVCEVR EPNKKSRIWL GTFPTVEMAA RAHDVAALAL
101: RGRSACLNFA DSAWRLRIPE TTCPKEIQKA ASEAAMAFQN ETTTEGSKTA AEAEEAAGEG VREGERRAEE QNGGVFYMDD EALLGMPNFF ENMAEGMLLP
201: PPEVGWNHND FDGVGDVSLW SFDE

Arabidopsis Description

DREB1DC-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:B2BJ26]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.