Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022770.1-P | Field mustard | nucleus | 95.33 | 95.33 |
| CDX84868 | Canola | nucleus | 94.86 | 94.86 |
| CDY70584 | Canola | nucleus | 90.65 | 90.65 |
| CDX92710 | Canola | nucleus | 90.65 | 90.23 |
| CDY52356 | Canola | nucleus | 78.5 | 77.42 |
| AT4G25480.1 | Thale cress | nucleus | 77.57 | 76.85 |
| AT4G25470.1 | Thale cress | nucleus | 77.1 | 76.39 |
| CDY52360 | Canola | nucleus | 76.17 | 73.76 |
| CDY66013 | Canola | nucleus | 61.22 | 68.59 |
| CDY65499 | Canola | nucleus | 69.16 | 68.52 |
| CDY52358 | Canola | nucleus | 59.81 | 67.72 |
| CDY00510 | Canola | nucleus | 68.22 | 66.36 |
| CDY31925 | Canola | nucleus | 66.82 | 65.0 |
| HORVU5Hr1G041600.1 | Barley | nucleus | 30.84 | 49.25 |
| GSMUA_Achr8P11980_001 | Banana | nucleus | 48.13 | 48.82 |
| GSMUA_Achr11P... | Banana | nucleus | 47.2 | 48.56 |
| GSMUA_Achr6P13340_001 | Banana | nucleus | 42.99 | 48.17 |
| CDY49205 | Canola | nucleus | 41.59 | 48.11 |
| GSMUA_Achr7P05900_001 | Banana | nucleus | 45.33 | 47.09 |
| CDY16016 | Canola | nucleus | 43.46 | 46.27 |
| HORVU0Hr1G016540.1 | Barley | nucleus | 46.26 | 45.62 |
| TraesCS6A01G256900.1 | Wheat | nucleus | 46.26 | 45.62 |
| TraesCS6B01G268100.1 | Wheat | nucleus | 46.26 | 45.62 |
| CDY57075 | Canola | nucleus | 43.93 | 45.41 |
| CDY26574 | Canola | nucleus | 43.46 | 45.37 |
| TraesCS6D01G238200.1 | Wheat | nucleus | 45.79 | 45.16 |
| CDY71145 | Canola | nucleus | 42.52 | 45.05 |
| GSMUA_Achr10P... | Banana | nucleus | 46.26 | 43.81 |
| CDY31270 | Canola | nucleus | 41.12 | 43.56 |
| GSMUA_Achr8P16070_001 | Banana | nucleus, plastid | 39.25 | 43.52 |
| Os02t0677300-02 | Rice | nucleus | 45.33 | 43.3 |
| GSMUA_Achr2P20280_001 | Banana | nucleus | 40.65 | 43.28 |
| Os04t0572400-00 | Rice | nucleus | 43.46 | 42.47 |
| TraesCS2D01G015200.1 | Wheat | nucleus | 37.38 | 41.88 |
| TraesCS2A01G399500.1 | Wheat | nucleus, plastid | 42.52 | 41.74 |
| Os06t0127100-01 | Rice | nucleus | 41.59 | 41.59 |
| TraesCS2B01G002700.1 | Wheat | nucleus, plastid | 36.45 | 41.05 |
| HORVU6Hr1G065580.4 | Barley | nucleus, plastid | 42.99 | 40.89 |
| Zm00001d017592_P001 | Maize | nucleus | 43.93 | 40.69 |
| Zm00001d002618_P001 | Maize | nucleus | 42.06 | 40.54 |
| TraesCS2D01G397000.1 | Wheat | nucleus | 40.65 | 40.09 |
| EES11288 | Sorghum | nucleus | 42.52 | 40.09 |
| TraesCS7A01G057800.1 | Wheat | nucleus, plastid | 38.78 | 39.52 |
| Os01t0968800-00 | Rice | nucleus | 40.19 | 39.27 |
| TraesCS4A01G433300.1 | Wheat | nucleus | 39.25 | 38.89 |
| TraesCS2B01G417500.1 | Wheat | nucleus | 38.32 | 38.5 |
| TraesCS7D01G052600.1 | Wheat | nucleus | 40.19 | 38.39 |
| EES02136 | Sorghum | nucleus | 42.99 | 38.02 |
| TraesCS7D01G052400.1 | Wheat | nucleus | 38.78 | 37.9 |
| TraesCS5A01G311000.1 | Wheat | nucleus | 38.78 | 37.73 |
| TraesCS5D01G318000.1 | Wheat | nucleus | 38.78 | 37.73 |
| TraesCS5B01G310900.1 | Wheat | nucleus | 30.84 | 37.71 |
| Zm00001d041981_P001 | Maize | nucleus | 42.99 | 37.55 |
| TraesCS7D01G052500.1 | Wheat | nucleus | 39.72 | 37.44 |
| TraesCS5A01G310200.1 | Wheat | nucleus | 36.92 | 37.26 |
| HORVU7Hr1G010510.2 | Barley | nucleus | 35.51 | 37.07 |
| TraesCS1B01G335100.1 | Wheat | nucleus | 38.32 | 36.94 |
| TraesCS5B01G311400.1 | Wheat | nucleus | 38.32 | 36.94 |
| TraesCS7A01G057700.1 | Wheat | nucleus | 38.78 | 36.89 |
| TraesCS5B01G311700.1 | Wheat | nucleus | 37.85 | 36.82 |
| Zm00001d036003_P001 | Maize | nucleus | 39.72 | 36.64 |
| TraesCS5A01G310700.1 | Wheat | nucleus | 37.85 | 36.49 |
| TraesCS5A01G310600.1 | Wheat | nucleus | 38.32 | 36.44 |
| TraesCS4A01G433200.1 | Wheat | nucleus | 38.78 | 36.4 |
| TraesCS5D01G317700.1 | Wheat | nucleus | 35.98 | 36.32 |
| HORVU5Hr1G080310.1 | Barley | nucleus | 37.38 | 36.2 |
| HORVU5Hr1G080400.1 | Barley | nucleus, plastid | 17.76 | 36.19 |
| TraesCS5D01G317200.1 | Wheat | nucleus | 35.98 | 36.15 |
| TraesCS5B01G311600.1 | Wheat | nucleus | 34.11 | 36.14 |
| TraesCS5A01G310400.1 | Wheat | nucleus | 38.78 | 36.09 |
| HORVU5Hr1G080300.1 | Barley | nucleus | 37.85 | 36.0 |
| TraesCS5B01G311500.1 | Wheat | nucleus | 35.51 | 35.85 |
| TraesCS5D01G317500.1 | Wheat | nucleus | 37.85 | 35.84 |
| Zm00001d021207_P001 | Maize | nucleus | 39.72 | 35.71 |
| TraesCS5D01G317300.1 | Wheat | nucleus | 38.32 | 35.65 |
| TraesCS5D01G317800.1 | Wheat | nucleus | 33.64 | 35.64 |
| EER87753 | Sorghum | nucleus | 41.12 | 35.34 |
| Os09t0522200-01 | Rice | nucleus | 39.25 | 35.29 |
| HORVU5Hr1G080220.2 | Barley | nucleus | 36.92 | 35.27 |
| TraesCS5B01G311200.1 | Wheat | nucleus | 37.38 | 35.24 |
| HORVU5Hr1G080340.1 | Barley | nucleus, plastid | 38.32 | 35.19 |
| TraesCS5D01G318600.1 | Wheat | nucleus | 38.32 | 35.19 |
| TraesCS5A01G310800.1 | Wheat | nucleus | 35.51 | 35.19 |
| TraesCS5A01G311700.1 | Wheat | nucleus | 37.85 | 34.76 |
| TraesCS5B01G312300.1 | Wheat | nucleus | 37.85 | 34.76 |
| TraesCS5D01G318200.1 | Wheat | nucleus, plastid | 37.38 | 34.63 |
| EER99212 | Sorghum | nucleus, plastid | 38.78 | 34.58 |
| HORVU5Hr1G080350.1 | Barley | nucleus | 34.58 | 34.58 |
| TraesCS5A01G311800.1 | Wheat | plastid | 39.25 | 34.43 |
| Zm00001d031728_P001 | Maize | nucleus, plastid | 36.45 | 34.36 |
| TraesCS5D01G318400.1 | Wheat | nucleus | 38.32 | 34.31 |
| Zm00001d021208_P001 | Maize | plastid | 36.92 | 34.2 |
| TraesCS6A01G186400.1 | Wheat | plastid | 37.85 | 34.18 |
| TraesCS5D01G318800.1 | Wheat | nucleus, plastid | 38.32 | 34.17 |
| TraesCS5B01G312000.1 | Wheat | nucleus | 34.11 | 34.11 |
| TraesCS5D01G318300.1 | Wheat | nucleus | 34.11 | 34.11 |
| TraesCS5A01G310000.1 | Wheat | plastid | 39.25 | 34.01 |
| TraesCS5A01G311300.1 | Wheat | nucleus | 33.64 | 33.96 |
| TraesCS6D01G173500.1 | Wheat | plastid | 38.32 | 33.74 |
| Os09t0522100-00 | Rice | nucleus | 38.78 | 33.74 |
| Zm00001d021205_P001 | Maize | plastid | 38.78 | 33.74 |
| EER99213 | Sorghum | nucleus | 36.92 | 33.62 |
| HORVU5Hr1G080430.1 | Barley | nucleus | 37.85 | 33.61 |
| TraesCS6B01G218000.1 | Wheat | plastid | 38.32 | 33.61 |
| TraesCS5B01G313000.1 | Wheat | nucleus | 36.92 | 33.47 |
| HORVU5Hr1G080440.2 | Barley | nucleus, plastid | 38.32 | 33.47 |
| TraesCS5B01G312700.1 | Wheat | nucleus | 37.85 | 33.33 |
| TraesCS6D01G366100.1 | Wheat | nucleus | 37.85 | 33.2 |
| TraesCS5A01G311500.1 | Wheat | nucleus, plastid | 36.92 | 33.19 |
| TraesCS5D01G318900.1 | Wheat | nucleus | 36.92 | 33.19 |
| Zm00001d052732_P001 | Maize | plastid | 34.58 | 33.18 |
| TraesCS6B01G420100.1 | Wheat | nucleus | 37.85 | 33.06 |
| TraesCS6D01G365800.1 | Wheat | nucleus | 37.85 | 33.06 |
| TraesCS5A01G311900.1 | Wheat | nucleus | 36.92 | 33.05 |
| TraesCS5B01G312100.1 | Wheat | nucleus, plastid | 36.92 | 33.05 |
| TraesCS5B01G312800.1 | Wheat | plastid | 36.92 | 32.92 |
| TraesCS5A01G311100.1 | Wheat | nucleus | 35.98 | 32.91 |
| TraesCS5D01G318100.1 | Wheat | nucleus, plastid | 35.98 | 32.91 |
| TraesCS6A01G381200.1 | Wheat | plastid | 37.38 | 32.65 |
| Zm00001d006170_P001 | Maize | nucleus | 35.05 | 32.61 |
| TraesCS6A01G381000.1 | Wheat | nucleus | 37.38 | 32.52 |
| TraesCS5B01G311900.1 | Wheat | plastid | 35.51 | 32.48 |
| TraesCS5B01G312900.1 | Wheat | nucleus | 36.92 | 32.38 |
| TraesCS5A01G311600.1 | Wheat | nucleus | 36.92 | 32.24 |
| EES14131 | Sorghum | nucleus, plastid | 35.98 | 32.08 |
| TraesCS5D01G317900.1 | Wheat | nucleus | 35.98 | 32.08 |
| TraesCS5B01G312200.1 | Wheat | nucleus | 36.45 | 31.84 |
| TraesCS5A01G312000.1 | Wheat | plastid | 35.98 | 31.82 |
| HORVU6Hr1G089320.1 | Barley | nucleus | 33.18 | 31.7 |
| TraesCS5D01G318500.1 | Wheat | nucleus | 35.98 | 31.69 |
| EER99214 | Sorghum | plastid | 35.51 | 31.15 |
| GSMUA_Achr4P19660_001 | Banana | mitochondrion, nucleus | 46.26 | 31.13 |
| TraesCS5A01G310100.1 | Wheat | nucleus | 38.78 | 30.86 |
| TraesCS5B01G310800.1 | Wheat | nucleus | 38.78 | 30.86 |
| TraesCS5D01G317100.1 | Wheat | nucleus, plastid | 38.32 | 30.48 |
| Zm00001d006169_P001 | Maize | plastid | 37.38 | 30.3 |
| EER99211 | Sorghum | plastid | 38.78 | 30.18 |
| TraesCS5A01G310500.1 | Wheat | nucleus, plastid | 38.78 | 30.18 |
| TraesCS5D01G317400.1 | Wheat | nucleus | 37.85 | 29.45 |
| HORVU5Hr1G080420.1 | Barley | nucleus, plastid | 38.78 | 29.23 |
| TraesCS5D01G317600.1 | Wheat | nucleus, plastid | 30.37 | 29.15 |
| OQU85641 | Sorghum | nucleus | 43.93 | 28.23 |
| HORVU5Hr1G080380.1 | Barley | nucleus, plastid | 35.05 | 27.99 |
| HORVU5Hr1G080230.1 | Barley | nucleus | 37.38 | 27.49 |
| TraesCS5A01G310900.1 | Wheat | mitochondrion | 22.43 | 27.27 |
| HORVU5Hr1G080450.1 | Barley | nucleus, plastid | 36.45 | 25.91 |
| TraesCS5B01G311300.1 | Wheat | nucleus | 34.11 | 25.17 |
| OQU89795 | Sorghum | mitochondrion, nucleus | 38.78 | 24.78 |
| Os06t0165600-01 | Rice | nucleus, plastid | 27.1 | 22.92 |
Protein Annotations
| MapMan:15.5.7.2 | MapMan:26.4.3.4.2 | Gene3D:3.30.730.10 | GO:A0A078JEI6 | UniProt:A0A078JEI6 | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY66018 | ProteinID:CDY66018 | ProteinID:CDY66018.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00051180001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31839 | PANTHER:PTHR31839:SF8 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI0004EE7F8A | SEG:seg | : | : | : |
Description
BnaC03g71900DBnaC03g71900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JEI6]
Coordinates
chrLK035046:-:2424..3164
Molecular Weight (calculated)
23811.0 Da
IEP (calculated)
4.779
GRAVY (calculated)
-0.407
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSFSAFSEM MGSENESPAL SGEYCPTLAA SCPKKPAGRK KFRETRHPIY RGVRQRHSGK WVCEVREPNK KSRIWLGTFL TAEIAARAHD VAAIALRGKS
101: ACLNFADSAW RLRIPETTCP KDIQKAAAEA AVAFQAEIND TTTDHGLDVE ETIVEAIFTE ENNDGFYMDE EESMFGMPSL LASMAEGMLL PPPSVRFEHN
201: YDFDGDADVS LWSY
101: ACLNFADSAW RLRIPETTCP KDIQKAAAEA AVAFQAEIND TTTDHGLDVE ETIVEAIFTE ENNDGFYMDE EESMFGMPSL LASMAEGMLL PPPSVRFEHN
201: YDFDGDADVS LWSY
001: MNSFSAFSEM FGSDYEPQGG DYCPTLATSC PKKPAGRKKF RETRHPIYRG VRQRNSGKWV SEVREPNKKT RIWLGTFQTA EMAARAHDVA ALALRGRSAC
101: LNFADSAWRL RIPESTCAKD IQKAAAEAAL AFQDETCDTT TTNHGLDMEE TMVEAIYTPE QSEGAFYMDE ETMFGMPTLL DNMAEGMLLP PPSVQWNHNY
201: DGEGDGDVSL WSY
101: LNFADSAWRL RIPESTCAKD IQKAAAEAAL AFQDETCDTT TTNHGLDMEE TMVEAIYTPE QSEGAFYMDE ETMFGMPTLL DNMAEGMLLP PPSVQWNHNY
201: DGEGDGDVSL WSY
Arabidopsis Description
DREB1BDRE/CRT-binding factor 1 [Source:UniProtKB/TrEMBL;Acc:B6DTR3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.