Factsheet for Os01t0968800-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0750800-01
Os10t0415900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G25490.1	Os10t0415900-01	AT3G54610.1	16603259
AT4G25490.1	Os03t0750800-01	AT4G16420.1	16603259

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041981_P001	Maize	nucleus	73.52	65.71
EES02136	Sorghum	nucleus	71.69	64.88
GSMUA_Achr6P13340_001	Banana	nucleus	52.05	59.69
GSMUA_Achr8P16070_001	Banana	nucleus, plastid	49.77	56.48
GSMUA_Achr2P20280_001	Banana	nucleus	50.68	55.22
GSMUA_Achr10P...	Banana	nucleus	55.71	53.98
Solyc03g026270.1.1	Tomato	nucleus	44.29	47.32
Solyc03g026280.2.1	Tomato	nucleus	44.29	46.19
PGSC0003DMT400037122	Potato	nucleus	43.84	44.24
Solyc03g124110.1.1	Tomato	nucleus	43.84	43.64
KRG91437	Soybean	nucleus	39.73	42.03
PGSC0003DMT400037119	Potato	mitochondrion	23.29	41.8
Os04t0572400-00	Rice	nucleus	41.55	41.55
KRH35383	Soybean	nucleus	38.36	40.98
VIT_16s0100g00380.t01	Wine grape	nucleus	40.64	40.83
KRH09144	Soybean	nucleus	42.92	40.69
Os02t0677300-02	Rice	nucleus	41.55	40.62
Bra027612.1-P	Field mustard	nucleus	34.25	40.54
CDY49205	Canola	nucleus	34.25	40.54
CDX84868	Canola	nucleus	39.27	40.19
Bra022770.1-P	Field mustard	nucleus	39.27	40.19
CDY66018	Canola	nucleus	39.27	40.19
CDX92710	Canola	nucleus	39.27	40.0
PGSC0003DMT400037118	Potato	mitochondrion	23.74	40.0
CDY00510	Canola	nucleus	40.18	40.0
Bra028290.1-P	Field mustard	nucleus	40.18	40.0
PGSC0003DMT400037120	Potato	nucleus	42.92	39.83
CDY65499	Canola	nucleus	39.27	39.81
AT1G63030.2	Thale cress	nucleus	32.88	39.78
CDY70584	Canola	nucleus	38.81	39.72
Bra019162.1-P	Field mustard	nucleus	38.81	39.72
CDY52356	Canola	nucleus	39.27	39.63
CDY71145	Canola	nucleus	36.53	39.6
Bra016763.1-P	Field mustard	nucleus	36.53	39.6
AT5G51990.1	Thale cress	nucleus	40.18	39.29
CDY57075	Canola	nucleus	36.99	39.13
AT4G25490.1	Thale cress	nucleus	37.9	38.97
Solyc12g056430.1.1	Tomato	nucleus	36.07	38.92
CDY52360	Canola	nucleus	39.27	38.91
Bra019777.1-P	Field mustard	nucleus	36.53	38.84
Os06t0127100-01	Rice	nucleus	37.9	38.78
CDY31925	Canola	nucleus	38.81	38.64
CDY31270	Canola	nucleus	35.62	38.61
CDY16016	Canola	nucleus	35.16	38.31
VIT_02s0025g04460.t01	Wine grape	nucleus	41.1	38.3
PGSC0003DMT400010876	Potato	nucleus	36.07	38.16
Bra026963.1-P	Field mustard	nucleus	35.62	38.05
CDY26574	Canola	nucleus	35.62	38.05
PGSC0003DMT400037121	Potato	nucleus	44.75	37.98
AT4G25470.1	Thale cress	nucleus	37.44	37.96
Solyc08g007830.1.1	Tomato	nucleus	39.27	37.55
PGSC0003DMT400032622	Potato	nucleus	40.64	37.4
Solyc08g007820.1.1	Tomato	nucleus	41.55	37.3
AT4G25480.1	Thale cress	nucleus	36.53	37.04
PGSC0003DMT400032621	Potato	nucleus	41.1	36.89
PGSC0003DMT400006896	Potato	cytosol	22.37	36.57
KRH77483	Soybean	nucleus	37.44	36.28
AT1G12610.1	Thale cress	nucleus	34.25	35.89
Os09t0522100-00	Rice	nucleus	39.73	35.37
KRH57258	Soybean	nucleus	40.18	34.65
KRH03987	Soybean	nucleus	40.18	34.51
PGSC0003DMT400032623	Potato	nucleus	38.81	34.14
CDY66013	Canola	nucleus	29.68	34.03
CDY52358	Canola	nucleus	29.22	33.86
Bra010461.1-P	Field mustard	nucleus	38.36	32.56
Os09t0522200-01	Rice	nucleus	35.16	32.35
Bra010460.1-P	Field mustard	nucleus	38.81	30.91
Bra010463.1-P	Field mustard	nucleus	29.68	29.02
KRH38616	Soybean	plastid	42.01	28.13
PGSC0003DMT400090651	Potato	nucleus	39.73	26.44
Os06t0165600-01	Rice	nucleus, plastid	25.11	21.74

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	EntrezGene:4323832	ProteinID:AAX23723.1	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ProteinID:BAB85326.1	ProteinID:BAF07435.1	ProteinID:BAS76412.1	InterPro:DNA-bd_dom_sf	ProteinID:EAZ14975.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os01g0968800
EnsemblPlants:Os01t0968800-00	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31839	PANTHER:PTHR31839:SF8
UniProt:Q8S9Z5	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00000A242F	RefSeq:XP_015645845.1	SEG:seg

Description

DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1FSimilar to Dehydration responsive element binding protein 1F (DREB1F protein). (Os01t0968800-00)

Coordinates

chr1:+:42727426..42728261

Molecular Weight (calculated)

23818.8 Da

IEP (calculated)

6.163

GRAVY (calculated)

-0.677

Length

219 amino acids

Sequence
(BLAST)

001: MDTEDTSSAS SSSVSPPSSP GGGHHHRLPP KRRAGRKKFR ETRHPVYRGV RARAGGSRWV CEVREPQAQA RIWLGTYPTP EMAARAHDVA AIALRGERGA
101: ELNFPDSPST LPRARTASPE DIRLAAAQAA ELYRRPPPPL ALPEDPQEGT SGGGATATSG RPAAVFVDED AIFDMPGLID DMARGMMLTP PAIGRSLDDW
201: AAIDDDDDHY HMDYKLWMD

Best Arabidopsis Sequence Match ( AT5G51990.1 )
(BLAST)

001: MNPFYSTFPD SFLSISDHRS PVSDSSECSP KLASSCPKKR AGRKKFRETR HPIYRGVRQR NSGKWVCEVR EPNKKSRIWL GTFPTVEMAA RAHDVAALAL
101: RGRSACLNFA DSAWRLRIPE TTCPKEIQKA ASEAAMAFQN ETTTEGSKTA AEAEEAAGEG VREGERRAEE QNGGVFYMDD EALLGMPNFF ENMAEGMLLP
201: PPEVGWNHND FDGVGDVSLW SFDE

Arabidopsis Description

DREB1DC-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:B2BJ26]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.