Factsheet for Os02t0677300-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0750800-01
Os10t0415900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G25490.1	Os10t0415900-01	AT3G54610.1	16603259
AT4G25490.1	Os03t0750800-01	AT4G16420.1	16603259

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G256900.1	Wheat	nucleus	79.02	81.57
TraesCS6D01G238200.1	Wheat	nucleus	78.57	81.11
TraesCS6B01G268100.1	Wheat	nucleus	78.57	81.11
HORVU0Hr1G016540.1	Barley	nucleus	77.23	79.72
Zm00001d017592_P001	Maize	nucleus	75.0	72.73
Os04t0572400-00	Rice	nucleus	69.2	70.78
HORVU6Hr1G065580.4	Barley	nucleus, plastid	70.54	70.22
GSMUA_Achr7P05900_001	Banana	nucleus	50.0	54.37
Os06t0127100-01	Rice	nucleus	48.21	50.47
OQU85641	Sorghum	nucleus	75.0	50.45
KRG91437	Soybean	nucleus	45.98	49.76
KRH35383	Soybean	nucleus	45.09	49.27
AT1G63030.2	Thale cress	nucleus	39.29	48.62
AT4G25480.1	Thale cress	nucleus	45.98	47.69
Bra016763.1-P	Field mustard	nucleus	42.41	47.03
CDY71145	Canola	nucleus	42.41	47.03
VIT_16s0100g00380.t01	Wine grape	nucleus	45.54	46.79
Bra027612.1-P	Field mustard	nucleus	38.39	46.49
CDY49205	Canola	nucleus	38.39	46.49
AT4G25490.1	Thale cress	nucleus	44.2	46.48
Bra028290.1-P	Field mustard	nucleus	45.54	46.36
CDY00510	Canola	nucleus	45.54	46.36
CDY31925	Canola	nucleus	45.54	46.36
CDY31270	Canola	nucleus	41.52	46.04
CDY57075	Canola	nucleus	42.41	45.89
Solyc03g026270.1.1	Tomato	nucleus	41.96	45.85
Bra022770.1-P	Field mustard	nucleus	43.75	45.79
Bra019162.1-P	Field mustard	nucleus	43.75	45.79
CDY70584	Canola	nucleus	43.75	45.79
PGSC0003DMT400037122	Potato	nucleus	44.2	45.62
CDY52356	Canola	nucleus	44.2	45.62
CDY66018	Canola	nucleus	43.3	45.33
CDX84868	Canola	nucleus	43.3	45.33
CDY16016	Canola	nucleus	40.62	45.27
CDY52360	Canola	nucleus	44.64	45.25
Bra019777.1-P	Field mustard	nucleus	41.52	45.15
CDX92710	Canola	nucleus	43.3	45.12
PGSC0003DMT400010876	Potato	nucleus	41.52	44.93
AT4G25470.1	Thale cress	nucleus	43.3	44.91
Bra026963.1-P	Field mustard	nucleus	41.07	44.88
CDY26574	Canola	nucleus	41.07	44.88
AT5G51990.1	Thale cress	nucleus	44.64	44.64
CDY65499	Canola	nucleus	42.86	44.44
VIT_02s0025g04460.t01	Wine grape	nucleus	45.54	43.4
Solyc12g056430.1.1	Tomato	nucleus	39.29	43.35
Solyc03g026280.2.1	Tomato	nucleus	40.62	43.33
KRH09144	Soybean	nucleus	44.64	43.29
Solyc03g124110.1.1	Tomato	nucleus	41.96	42.73
PGSC0003DMT400037119	Potato	mitochondrion	23.21	42.62
AT1G12610.1	Thale cress	nucleus	39.73	42.58
PGSC0003DMT400037120	Potato	nucleus	44.2	41.95
Os01t0968800-00	Rice	nucleus	40.62	41.55
PGSC0003DMT400037118	Potato	mitochondrion	24.11	41.54
CDY66013	Canola	nucleus	34.82	40.84
Solyc08g007830.1.1	Tomato	nucleus	41.52	40.61
KRH77483	Soybean	nucleus	40.62	40.27
CDY52358	Canola	nucleus	33.93	40.21
PGSC0003DMT400032621	Potato	nucleus	43.75	40.16
PGSC0003DMT400032622	Potato	nucleus	42.41	39.92
Solyc08g007820.1.1	Tomato	nucleus	43.3	39.75
Os09t0522200-01	Rice	nucleus	41.52	39.08
PGSC0003DMT400037121	Potato	nucleus	43.75	37.98
PGSC0003DMT400032623	Potato	nucleus	41.07	36.95
Bra010461.1-P	Field mustard	nucleus	41.96	36.43
Bra010460.1-P	Field mustard	nucleus	44.64	36.36
Bra010463.1-P	Field mustard	nucleus	36.16	36.16
KRH03987	Soybean	nucleus	41.07	36.08
GSMUA_Achr4P19660_001	Banana	mitochondrion, nucleus	50.89	35.85
KRH57258	Soybean	nucleus	40.62	35.83
Os09t0522100-00	Rice	nucleus	37.05	33.74
PGSC0003DMT400006896	Potato	cytosol	19.2	32.09
KRH38616	Soybean	plastid	45.54	31.19
PGSC0003DMT400090651	Potato	nucleus	38.39	26.14
Os06t0165600-01	Rice	nucleus, plastid	26.79	23.72

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.1	EntrezGene:4330306	EMBL:AK060550	EMBL:AK106041	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ProteinID:BAD29237.1	ProteinID:BAD29543.1	ProteinID:BAF09641.1	ProteinID:BAS80276.1	InterPro:DNA-bd_dom_sf
ProteinID:EAZ24170.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	EnsemblPlantsGene:Os02g0677300	EnsemblPlants:Os02t0677300-02	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31839	PANTHER:PTHR31839:SF20	UniProt:Q6EP77	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00003CE917
RefSeq:XP_015624757.1	SEG:seg	:	:	:	:

Description

DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1GSimilar to CRT/DRE binding factor 1. (Os02t0677300-02)

Coordinates

chr2:+:27652935..27654206

Molecular Weight (calculated)

23947.7 Da

IEP (calculated)

4.960

GRAVY (calculated)

-0.536

Length

224 amino acids

Sequence
(BLAST)

001: MDVSAALSSD YSSGTPSPVA ADADDGSSAY MTVSSAPPKR RAGRTKFKET RHPVFKGVRR RNPGRWVCEV REPHGKQRIW LGTFETAEMA ARAHDVAALA
101: LRGRAACLNF ADSPRRLRVP PIGASHDDIR RAAAEAAEAF RPPPDESNAA TEVAAAASGA TNSNAEQFAS HPYYEVMDDG LDLGMQGYLD MAQGMLIDPP
201: PMAGDPAVGS GEDDNDGEVQ LWSY

Best Arabidopsis Sequence Match ( AT5G51990.1 )
(BLAST)

001: MNPFYSTFPD SFLSISDHRS PVSDSSECSP KLASSCPKKR AGRKKFRETR HPIYRGVRQR NSGKWVCEVR EPNKKSRIWL GTFPTVEMAA RAHDVAALAL
101: RGRSACLNFA DSAWRLRIPE TTCPKEIQKA ASEAAMAFQN ETTTEGSKTA AEAEEAAGEG VREGERRAEE QNGGVFYMDD EALLGMPNFF ENMAEGMLLP
201: PPEVGWNHND FDGVGDVSLW SFDE

Arabidopsis Description

DREB1DC-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:B2BJ26]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.