Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027612.1-P Field mustard nucleus 100.0 100.0
AT1G63030.2 Thale cress nucleus 85.95 87.85
CDY16016 Canola nucleus 71.89 66.17
CDY26574 Canola nucleus 72.43 65.37
CDY57075 Canola nucleus 72.97 65.22
CDY31270 Canola nucleus 69.19 63.37
CDY71145 Canola nucleus 69.19 63.37
CDY00510 Canola nucleus 52.43 44.09
CDY31925 Canola nucleus 52.43 44.09
VIT_16s0100g00380.t01 Wine grape nucleus 51.89 44.04
GSMUA_Achr6P13340_001 Banana nucleus 45.41 43.98
Solyc03g026270.1.1 Tomato nucleus 48.11 43.41
Solyc03g026280.2.1 Tomato nucleus 48.11 42.38
GSMUA_Achr11P... Banana nucleus 47.57 42.31
HORVU5Hr1G041600.1 Barley nucleus 30.27 41.79
CDX84868 Canola nucleus 48.11 41.59
CDY66018 Canola nucleus 48.11 41.59
PGSC0003DMT400037122 Potato nucleus 48.65 41.47
CDX92710 Canola nucleus 48.11 41.4
GSMUA_Achr8P11980_001 Banana nucleus 47.03 41.23
CDY70584 Canola nucleus 47.57 41.12
PGSC0003DMT400037119 Potato mitochondrion 26.49 40.16
CDY52356 Canola nucleus 47.03 40.09
CDY52360 Canola nucleus 47.57 39.82
Solyc03g124110.1.1 Tomato nucleus 47.03 39.55
KRH77483 Soybean nucleus 48.11 39.38
TraesCS6D01G238200.1 Wheat nucleus 45.95 39.17
Zm00001d002618_P001 Maize nucleus 46.49 38.74
HORVU0Hr1G016540.1 Barley nucleus 45.41 38.71
TraesCS6A01G256900.1 Wheat nucleus 45.41 38.71
TraesCS6B01G268100.1 Wheat nucleus 45.41 38.71
PGSC0003DMT400037118 Potato mitochondrion 27.03 38.46
CDY65499 Canola nucleus 44.86 38.43
Os02t0677300-02 Rice nucleus 46.49 38.39
GSMUA_Achr7P05900_001 Banana nucleus 42.7 38.35
Os04t0572400-00 Rice nucleus 44.32 37.44
GSMUA_Achr2P20280_001 Banana nucleus 40.54 37.31
PGSC0003DMT400037120 Potato nucleus 47.57 37.29
GSMUA_Achr10P... Banana nucleus 45.41 37.17
TraesCS2A01G399500.1 Wheat nucleus, plastid 43.78 37.16
EES11288 Sorghum nucleus 45.41 37.0
TraesCS2D01G397000.1 Wheat nucleus 43.24 36.87
GSMUA_Achr8P16070_001 Banana nucleus, plastid 38.38 36.79
TraesCS5B01G311500.1 Wheat nucleus 41.62 36.32
TraesCS5B01G311600.1 Wheat nucleus 38.92 35.64
TraesCS5A01G310200.1 Wheat nucleus 40.54 35.38
TraesCS5A01G311300.1 Wheat nucleus 40.54 35.38
TraesCS5D01G317700.1 Wheat nucleus 40.54 35.38
TraesCS5D01G317800.1 Wheat nucleus 38.38 35.15
TraesCS5D01G318300.1 Wheat nucleus 40.54 35.05
KRH57258 Soybean nucleus 48.11 35.04
TraesCS5D01G318000.1 Wheat nucleus 41.62 35.0
KRH03987 Soybean nucleus 48.11 34.9
PGSC0003DMT400037121 Potato nucleus 48.65 34.88
TraesCS5B01G310900.1 Wheat nucleus 32.97 34.86
TraesCS5D01G317200.1 Wheat nucleus 40.0 34.74
Zm00001d017592_P001 Maize nucleus 43.24 34.63
HORVU5Hr1G080350.1 Barley nucleus 40.0 34.58
TraesCS5A01G311000.1 Wheat nucleus 41.08 34.55
TraesCS5B01G311700.1 Wheat nucleus 41.08 34.55
HORVU5Hr1G080220.2 Barley nucleus 41.62 34.38
TraesCS5D01G318600.1 Wheat nucleus 43.24 34.33
Os01t0968800-00 Rice nucleus 40.54 34.25
TraesCS1B01G335100.1 Wheat nucleus 41.08 34.23
TraesCS5A01G310700.1 Wheat nucleus 41.08 34.23
TraesCS5B01G311400.1 Wheat nucleus 41.08 34.23
TraesCS5B01G312000.1 Wheat nucleus 39.46 34.11
HORVU5Hr1G080310.1 Barley nucleus 40.54 33.94
TraesCS5A01G310800.1 Wheat nucleus 39.46 33.8
TraesCS5A01G310600.1 Wheat nucleus 41.08 33.78
TraesCS2D01G015200.1 Wheat nucleus 34.59 33.51
TraesCS5A01G311700.1 Wheat nucleus 42.16 33.48
TraesCS5B01G312300.1 Wheat nucleus 42.16 33.48
CDY52358 Canola nucleus 34.05 33.33
HORVU6Hr1G065580.4 Barley nucleus, plastid 40.54 33.33
TraesCS2B01G417500.1 Wheat nucleus 38.38 33.33
TraesCS5D01G317500.1 Wheat nucleus 40.54 33.19
Zm00001d052732_P001 Maize plastid 40.0 33.18
Os06t0127100-01 Rice nucleus 38.38 33.18
HORVU5Hr1G080340.1 Barley nucleus, plastid 41.62 33.05
CDY66013 Canola nucleus 34.05 32.98
TraesCS5D01G318200.1 Wheat nucleus, plastid 41.08 32.9
HORVU5Hr1G080300.1 Barley nucleus 40.0 32.89
Zm00001d041981_P001 Maize nucleus 43.24 32.65
EES02136 Sorghum nucleus 42.7 32.64
TraesCS2B01G002700.1 Wheat nucleus, plastid 33.51 32.63
TraesCS5A01G310400.1 Wheat nucleus 40.54 32.61
TraesCS5D01G317300.1 Wheat nucleus 40.54 32.61
TraesCS5B01G311200.1 Wheat nucleus 40.0 32.6
TraesCS5B01G311900.1 Wheat plastid 41.08 32.48
TraesCS5B01G312800.1 Wheat plastid 41.08 31.67
TraesCS5D01G318800.1 Wheat nucleus, plastid 41.08 31.67
TraesCS5A01G311100.1 Wheat nucleus 40.0 31.62
TraesCS5D01G318100.1 Wheat nucleus, plastid 40.0 31.62
TraesCS7A01G057700.1 Wheat nucleus 38.38 31.56
HORVU5Hr1G080430.1 Barley nucleus 41.08 31.54
TraesCS7A01G057800.1 Wheat nucleus, plastid 35.68 31.43
TraesCS5A01G311900.1 Wheat nucleus 40.54 31.38
Zm00001d006170_P001 Maize nucleus 38.92 31.3
Os09t0522100-00 Rice nucleus 41.62 31.3
TraesCS6A01G186400.1 Wheat plastid 40.0 31.22
TraesCS5B01G312900.1 Wheat nucleus 41.08 31.15
Os09t0522200-01 Rice nucleus 40.0 31.09
TraesCS7D01G052400.1 Wheat nucleus 36.76 31.05
TraesCS4A01G433300.1 Wheat nucleus 36.22 31.02
Zm00001d031728_P001 Maize nucleus, plastid 37.84 30.84
TraesCS5A01G311800.1 Wheat plastid 40.54 30.74
TraesCS4A01G433200.1 Wheat nucleus 37.84 30.7
HORVU5Hr1G080440.2 Barley nucleus, plastid 40.54 30.61
TraesCS5B01G313000.1 Wheat nucleus 38.92 30.51
TraesCS5B01G312700.1 Wheat nucleus 40.0 30.45
TraesCS6D01G173500.1 Wheat plastid 40.0 30.45
EER99212 Sorghum nucleus, plastid 39.46 30.42
TraesCS6B01G218000.1 Wheat plastid 40.0 30.33
TraesCS5D01G318900.1 Wheat nucleus 38.92 30.25
EER99213 Sorghum nucleus 38.38 30.21
TraesCS6A01G381200.1 Wheat plastid 40.0 30.2
TraesCS5D01G318400.1 Wheat nucleus 38.92 30.13
TraesCS5A01G310000.1 Wheat plastid 40.0 29.96
EER99214 Sorghum plastid 39.46 29.92
TraesCS6D01G366100.1 Wheat nucleus 39.46 29.92
HORVU6Hr1G089320.1 Barley nucleus 36.22 29.91
TraesCS7D01G052600.1 Wheat nucleus 36.22 29.91
Zm00001d021208_P001 Maize plastid 37.3 29.87
TraesCS5A01G311500.1 Wheat nucleus, plastid 38.38 29.83
TraesCS6B01G420100.1 Wheat nucleus 39.46 29.8
TraesCS6D01G365800.1 Wheat nucleus 39.46 29.8
TraesCS5A01G312000.1 Wheat plastid 38.92 29.75
TraesCS5D01G318500.1 Wheat nucleus 38.92 29.63
EES14131 Sorghum nucleus, plastid 38.38 29.58
HORVU5Hr1G080400.1 Barley nucleus, plastid 16.76 29.52
Zm00001d021207_P001 Maize nucleus 37.84 29.41
TraesCS5A01G311600.1 Wheat nucleus 38.92 29.39
TraesCS5B01G312200.1 Wheat nucleus 38.92 29.39
Zm00001d036003_P001 Maize nucleus 36.76 29.31
TraesCS5B01G312100.1 Wheat nucleus, plastid 37.84 29.29
HORVU7Hr1G010510.2 Barley nucleus 32.43 29.27
TraesCS6A01G381000.1 Wheat nucleus 38.92 29.27
Zm00001d021205_P001 Maize plastid 38.92 29.27
TraesCS7D01G052500.1 Wheat nucleus 35.14 28.63
EER87753 Sorghum nucleus 38.38 28.51
TraesCS5D01G317900.1 Wheat nucleus 36.22 27.92
TraesCS5A01G310100.1 Wheat nucleus 40.54 27.88
TraesCS5B01G310800.1 Wheat nucleus 40.54 27.88
HORVU5Hr1G080420.1 Barley nucleus, plastid 42.7 27.82
TraesCS5D01G317100.1 Wheat nucleus, plastid 40.0 27.51
TraesCS5A01G310500.1 Wheat nucleus, plastid 40.54 27.27
TraesCS5D01G317400.1 Wheat nucleus 40.0 26.91
TraesCS5D01G317600.1 Wheat nucleus, plastid 32.43 26.91
PGSC0003DMT400090651 Potato nucleus 47.57 26.75
TraesCS5A01G310900.1 Wheat mitochondrion 25.41 26.7
EER99211 Sorghum plastid 39.46 26.55
Zm00001d006169_P001 Maize plastid 37.3 26.14
HORVU5Hr1G080380.1 Barley nucleus, plastid 37.84 26.12
HORVU5Hr1G080230.1 Barley nucleus 39.46 25.09
GSMUA_Achr4P19660_001 Banana mitochondrion, nucleus 42.16 24.53
OQU85641 Sorghum nucleus 43.24 24.02
HORVU5Hr1G080450.1 Barley nucleus, plastid 38.92 23.92
TraesCS5B01G311300.1 Wheat nucleus 36.76 23.45
Os06t0165600-01 Rice nucleus, plastid 30.27 22.13
OQU89795 Sorghum mitochondrion, nucleus 40.0 22.09
Protein Annotations
MapMan:15.5.7.2Gene3D:3.30.730.10GO:A0A078IEC9UniProt:A0A078IEC9InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sf
EnsemblPlants:CDY49205ProteinID:CDY49205ProteinID:CDY49205.1InterPro:DNA-bd_dom_sfGO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0006629GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0010371GO:GO:0019748GO:GO:0048510
EnsemblPlantsGene:GSBRNA2T00092570001InterPro:IPR001471InterPro:IPR036955PFAM:PF00847PRINTS:PR00367PFscan:PS51032
PANTHER:PTHR31839PANTHER:PTHR31839:SF8SMART:SM00380SUPFAM:SSF54171UniParc:UPI0002542494:
Description
BnaA09g10730DDehydration-responsive element-binding protein 1E [Source:Projected from Arabidopsis thaliana (AT1G63030) UniProtKB/Swiss-Prot;Acc:Q9SGJ6]
Coordinates
chrLK032817:+:91436..91993
Molecular Weight (calculated)
20811.7 Da
IEP (calculated)
5.403
GRAVY (calculated)
-0.542
Length
185 amino acids
Sequence
(BLAST)
001: MENNNNVLAE MKPKKRAGRK IFKETRHPIY RGVRSRNGDK WVCEVREPIH QRRVWLGTYP TAEMAARAHD VAVLALRGRS ACLNFSDSAW RLPAAESTDP
101: DTIRRTAAEA AEMFRPPEFS TGITVLPSSG GGELDTVEEG EGVAGMMMRL AEEPLMSPPR AYVDMNTSVY VEEEMGYEEL SLWSY
Best Arabidopsis Sequence Match ( AT1G63030.1 )
(BLAST)
001: MENDDITVAE MKPKKRAGRR IFKETRHPIY RGVRRRDGDK WVCEVREPIH QRRVWLGTYP TADMAARAHD VAVLALRGRS ACLNFSDSAW RLPVPASTDP
101: DTIRRTAAEA AEMFRPPEFS TGITVLPSAS EFDTSDEGVA GMMMRLAEEP LMSPPRSYID MNTSVYVDEE MCYEDLSLWS Y
Arabidopsis Description
DREB1EDehydration-responsive element-binding protein 1E [Source:UniProtKB/Swiss-Prot;Acc:Q9SGJ6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.